RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 VBP1P61758 197 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 PRKCDQ05655 676 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 GRIK2Q13002 908 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 FSCN1Q16658 493 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 TYSND1Q2T9J0 566 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 PLEKHG6Q3KR16 790 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 ZNF404Q494X3 552 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 FAM98BQ52LJ0 330 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CEP78Q5JTW2 689 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 BRMS1LQ5PSV4 323 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 ZNF470Q6ECI4 717 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 ABHD15Q6UXT9 468 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 FIG4Q92562 907 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 SGCDQ92629 289 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CDHR1Q96JP9 859 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 NSMCE2Q96MF7 247 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 RBM4BQ9BQ04 359 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 C11orf84Q9BUA3 381 aaPredicted RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 RBM4Q9BWF3 364 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CEP41Q9BYV8 373 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CCDC90BQ9GZT6 254 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 KAT8Q9H7Z6 458 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 JPH1Q9HDC5 661 aaPredicted RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 KLHL8Q9P2G9 620 aaPredicted RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 INTS6Q9UL03 887 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 TPRKBQ9Y3C4 175 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 LRRC37AA6NMS7 1700 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 LTBP4Q8N2S1 1624 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 FAM95CA0A1B0GW59 222 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 G3V2T6 193 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CCRL2O00421 344 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 PSMD3O43242 534 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 ZW10O43264 779 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 MFSD11O43934 449 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 ALDOCP09972 364 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 YWHAQP27348 245 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 MRPL19P49406 292 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CLCNKBP51801 687 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 POU4F1Q01851 419 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 NFYCQ13952 458 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CAPRIN1Q14444 709 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CTU2Q2VPK5 515 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 RFX4Q33E94 735 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CCNJQ5T5M9 372 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 AGAP9Q5VTM2 703 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 KCTD11Q693B1 232 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 GALNT12Q8IXK2 581 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CLYBLQ8N0X4 340 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 AADATQ8N5Z0 425 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 CCNYQ8ND76 341 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 VPS37AQ8NEZ2 397 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 FBLIM1Q8WUP2 373 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 LPAR1Q92633 364 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 PEX13Q92968 403 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 REXO5Q96IC2 774 aaKnown RBP12.76□□□□□ -0.37
SMAD1-215ENST00000515385 MBOAT4Q96T53 435 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 SEPHS2Q99611 448 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 KIFC1Q9BW19 673 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 RUBCNLQ9H714 662 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 FBXO28Q9NVF7 368 aa12.76□□□□□ -0.37
SMAD1-215ENST00000515385 A0A1W2PP18 115 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 ZSCAN5BA6NJL1 495 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 A8MT66 165 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 FADS2P1A8MWK0 482 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 B8ZZF3 427 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 PPEF1O14829 653 aaPredicted RBP12.75□□□□□ -0.37
SMAD1-215ENST00000515385 VPS4BO75351 444 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 AHSGP02765 367 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 SPNP16150 400 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 NAGAP17050 411 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 CCNCP24863 283 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 ARL1P40616 181 aaPredicted RBP12.75□□□□□ -0.37
SMAD1-215ENST00000515385 PRIM2P49643 509 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 SLC12A2P55011 1212 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 OR2B6P58173 313 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 ISL1P61371 349 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 GALK2Q01415 458 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 POU5F1BQ06416 359 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 TRAF3Q13114 568 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 ORC1Q13415 861 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 TECRLQ5HYJ1 363 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 NDUFAF5Q5TEU4 345 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 ZNF691Q5VV52 312 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 NEK5Q6P3R8 708 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 BLOC1S3Q6QNY0 202 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 PRR23BQ6ZRT6 265 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 PDZD4Q76G19 769 aaPredicted RBP12.75□□□□□ -0.37
SMAD1-215ENST00000515385 CCDC28AQ8IWP9 274 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 UBQLNLQ8IYU4 475 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 ELMOD2Q8IZ81 293 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 HEXDCQ8WVB3 486 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 ZHX1-C8orf76Q96EF9 292 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 TMEM246Q9BRR3 403 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 AKTIPQ9H8T0 292 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 SDR39U1Q9NRG7 319 aaPredicted RBP12.75□□□□□ -0.37
SMAD1-215ENST00000515385 IL37Q9NZH6 218 aa12.75□□□□□ -0.37
SMAD1-215ENST00000515385 UBA2Q9UBT2 640 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms