RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 GALNT13Q8IUC8 556 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 PHYKPLQ8IUZ5 450 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 SLC35F6Q8N357 371 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 ARL10Q8N8L6 244 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 NAT6Q93015 286 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
PTCD2-210ENST00000515198 OR2M4Q96R27 311 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 RMI1Q9H9A7 625 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 ARNT2Q9HBZ2 717 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 IL17CQ9P0M4 197 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 KLK13Q9UKR3 277 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 DRG1Q9Y295 367 aaKnown RBP12.39□□□□□ -0.43
PTCD2-210ENST00000515198 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
PTCD2-210ENST00000515198 LY6G6EA0A0G2JKS1 128 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 CPED1A4D0V7 1026 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 EME2A4GXA9 379 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 ERI2A8K979 691 aaKnown RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 E7EVH7 732 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 USP12O75317 370 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 AP2A1O95782 977 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 FUCA1P04066 466 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 LPOP22079 712 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 LMAN1P49257 510 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 OLIG2Q13516 323 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 SPARCL1Q14515 664 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 KCTD11Q693B1 232 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 MARK2Q7KZI7 788 aaKnown RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 GSTA5Q7RTV2 222 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 TMPRSS7Q7RTY8 843 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 LINC00523Q86TU6 105 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 TMPRSS12Q86WS5 348 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 SLC35F3Q8IY50 421 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 RASGEF1CQ8N431 466 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 TAB3Q8N5C8 712 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 FAM46DQ8NEK8 389 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 CCL4L1Q8NHW4 92 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 IFI44Q8TCB0 444 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 DTX3LQ8TDB6 740 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 BRSK1Q8TDC3 778 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 GPBAR1Q8TDU6 330 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 GLYATL1Q969I3 302 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 NAP1L3Q99457 506 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 SIRPGQ9P1W8 387 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 PAK5Q9P286 719 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 GULP1Q9UBP9 304 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 ZNHIT2Q9UHR6 403 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 CNOT6Q9ULM6 557 aaKnown RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 PADI4Q9UM07 663 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 MSRB2Q9Y3D2 182 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 U3KQA8 63 aa12.38□□□□□ -0.43
PTCD2-210ENST00000515198 ZNF106Q9H2Y7 1883 aaKnown RBP12.38□□□□□ -0.43
PTCD2-210ENST00000515198 GLYATL1P3A0A0U1RQE8 302 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 FAM221BA6H8Z2 402 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 BUD23O43709 281 aaKnown RBP12.37□□□□□ -0.43
PTCD2-210ENST00000515198 DNAJC6O75061 913 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 GAS8O95995 478 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 MYF5P13349 255 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 ADCY8P40145 1251 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 CTBSQ01459 385 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 ITGA9Q13797 1035 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 LRP8Q14114 963 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 SMAD1Q15797 465 aaKnown RBP12.37□□□□□ -0.43
PTCD2-210ENST00000515198 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 SLC30A9Q6PML9 568 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 C4orf22Q6V702 233 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 EFL1Q7Z2Z2 1120 aaKnown RBP12.37□□□□□ -0.43
PTCD2-210ENST00000515198 KYQ8NBH2 561 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 OR6C4Q8NGE1 309 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 GDAP1Q8TB36 358 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
PTCD2-210ENST00000515198 VPS35Q96QK1 796 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 C19orf43Q9BQ61 176 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 DPEP2Q9H4A9 486 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 TRIM39Q9HCM9 518 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 IL26Q9NPH9 171 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 ARL5AQ9Y689 179 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 OAS3Q9Y6K5 1087 aaKnown RBP12.37□□□□□ -0.43
PTCD2-210ENST00000515198 SPTBN2O15020 2390 aa12.37□□□□□ -0.43
PTCD2-210ENST00000515198 B4DGG1 531 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 PGRMC1O00264 195 aaKnown RBP12.36□□□□□ -0.43
PTCD2-210ENST00000515198 VEGFDO43915 354 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 NUAK1O60285 661 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 JUPP14923 745 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 AK4P27144 223 aaPredicted RBP12.36□□□□□ -0.43
PTCD2-210ENST00000515198 ACTR1BP42025 376 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 ACTR1AP61163 376 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 GTF2H3Q13889 308 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 ATP13A5Q4VNC0 1218 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 HES3Q5TGS1 186 aa12.36□□□□□ -0.43
PTCD2-210ENST00000515198 OGFOD3Q6PK18 319 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms