RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SPRED1Q7Z699 444 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 ZNF567Q8N184 647 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 WDR36Q8NI36 951 aaKnown RBP24.31■■□□□ 1.48
SNF8-213ENST00000514929 SPATA16Q9BXB7 569 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 EPB41L5Q9HCM4 733 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 VPS18Q9P253 973 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 ZNHIT2Q9UHR6 403 aa24.31■■□□□ 1.48
SNF8-213ENST00000514929 CNOT6Q9ULM6 557 aaKnown RBP24.31■■□□□ 1.48
SNF8-213ENST00000514929 OAS3Q9Y6K5 1087 aaKnown RBP24.31■■□□□ 1.48
SNF8-213ENST00000514929 CCDC187A0A096LP49 1063 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 RHPN2P1A8MT19 583 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 F5H423 210 aaPredicted RBP24.3■■□□□ 1.48
SNF8-213ENST00000514929 ECEL1O95672 775 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 CDC25BP30305 580 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 WNT3AP56704 352 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 RWDD2BP57060 319 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 XRCC4Q13426 336 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 LRP8Q14114 963 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 NOMO1Q15155 1222 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 TMEM139Q8IV31 216 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 TXLNBQ8N3L3 684 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 ARL14Q8N4G2 192 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 GPR26Q8NDV2 337 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 FCRL5Q96RD9 977 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 FERMT1Q9BQL6 677 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 OSBPL8Q9BZF1 889 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 THSD1Q9NS62 852 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 TRHDEQ9UKU6 1024 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 EFR3BQ9Y2G0 817 aa24.3■■□□□ 1.48
SNF8-213ENST00000514929 A0A1W2PNU3 283 aaPredicted RBP24.29■■□□□ 1.48
SNF8-213ENST00000514929 GRID2IPA4D2P6 1211 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 TMX2-CTNND1H3BSU7 103 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 INHBCP55103 352 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 PCBP4P57723 403 aaKnown RBP24.29■■□□□ 1.48
SNF8-213ENST00000514929 DCDC1P59894 354 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 ERVPABLB-1P60509 514 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 KIF5AQ12840 1032 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 ZNF569Q5MCW4 686 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 KDELC1Q6UW63 502 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 B3GNT8Q7Z7M8 397 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 C17orf82Q86X59 251 aaPredicted RBP24.29■■□□□ 1.48
SNF8-213ENST00000514929 PATE1Q8WXA2 126 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 TMEM74Q96NL1 305 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 ZSCAN5AQ9BUG6 496 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 FOXP3Q9BZS1 431 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 STRADBQ9C0K7 418 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 RSPH14Q9UHP6 348 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 ATXN7L1Q9ULK2 861 aaPredicted RBP24.29■■□□□ 1.48
SNF8-213ENST00000514929 PRKAB1Q9Y478 270 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 PCDHGA8Q9Y5G5 932 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 SPO11Q9Y5K1 396 aa24.29■■□□□ 1.48
SNF8-213ENST00000514929 ARHGEF17Q96PE2 2063 aaPredicted RBP24.28■■□□□ 1.48
SNF8-213ENST00000514929 DNAJC6O75061 913 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 ITPKBP27987 946 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 RBL1P28749 1068 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 OTUD4Q01804 1114 aaKnown RBP24.28■■□□□ 1.48
SNF8-213ENST00000514929 CCDC173Q0VFZ6 552 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 CHST15Q7LFX5 561 aaPredicted RBP24.28■■□□□ 1.48
SNF8-213ENST00000514929 NAGSQ8N159 534 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 LRRC57Q8N9N7 239 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 ZNF248Q8NDW4 579 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 ACTL9Q8TC94 416 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 LIN37Q96GY3 246 aaPredicted RBP24.28■■□□□ 1.48
SNF8-213ENST00000514929 OXNAD1Q96HP4 312 aaPredicted RBP24.28■■□□□ 1.48
SNF8-213ENST00000514929 HERPUD2Q9BSE4 406 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 RMI1Q9H9A7 625 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 ASCL3Q9NQ33 180 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 NFKBIL1Q9UBC1 381 aaPredicted RBP24.28■■□□□ 1.48
SNF8-213ENST00000514929 AMFRQ9UKV5 643 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 ITPR1Q14643 2758 aa24.28■■□□□ 1.48
SNF8-213ENST00000514929 FAM208BQ5VWN6 2430 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 LOC285095A0A1B0GVY8 99 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 GOLGA6L6A8MZA4 724 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 ZW10O43264 779 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 SLC25A14O95258 325 aaPredicted RBP24.27■■□□□ 1.48
SNF8-213ENST00000514929 EPOP01588 193 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 ALDH4A1P30038 563 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 PTPN7P35236 360 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 SIRPB2Q5JXA9 342 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 IGF2-ASQ6U949 168 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 PDZD3Q86UT5 571 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 SLC25A41Q8N5S1 370 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 TRAM1L1Q8N609 369 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 IPMKQ8NFU5 416 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 MRGPRX2Q96LB1 330 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 SLC46A1Q96NT5 459 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 DESI2Q9BSY9 194 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 C10orf88Q9H8K7 445 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 ARFGAP3Q9NP61 516 aa24.27■■□□□ 1.48
SNF8-213ENST00000514929 PMS2P1A4D2B8 440 aa24.26■■□□□ 1.47
SNF8-213ENST00000514929 AURKAO14965 403 aa24.26■■□□□ 1.47
SNF8-213ENST00000514929 BPIP17213 487 aa24.26■■□□□ 1.47
SNF8-213ENST00000514929 CCKBRP32239 447 aa24.26■■□□□ 1.47
SNF8-213ENST00000514929 OR1D5P58170 312 aa24.26■■□□□ 1.47
SNF8-213ENST00000514929 EIF3EP60228 445 aaKnown RBP24.26■■□□□ 1.47
SNF8-213ENST00000514929 B4GALNT1Q00973 533 aa24.26■■□□□ 1.47
SNF8-213ENST00000514929 EIF3IQ13347 325 aaKnown RBP24.26■■□□□ 1.47
SNF8-213ENST00000514929 MPP3Q13368 585 aa24.26■■□□□ 1.47
SNF8-213ENST00000514929 MAP9Q49MG5 647 aa24.26■■□□□ 1.47
SNF8-213ENST00000514929 PDPK2PQ6A1A2 396 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms