RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 OR8K1Q8NGG5 319 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 SLC35G2Q8TBE7 412 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
PFDN1-206ENST00000514611 EID2BQ96D98 161 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 CHP1Q99653 195 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 MLPHQ9BV36 600 aaPredicted RBP13.21□□□□□ -0.29
PFDN1-206ENST00000514611 ARFGAP3Q9NP61 516 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 KCNK4Q9NYG8 393 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 PKD2L2Q9NZM6 624 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 LCMT1Q9UIC8 334 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 RPL26L1Q9UNX3 145 aaKnown RBP13.21□□□□□ -0.29
PFDN1-206ENST00000514611 KCNK6Q9Y257 313 aa13.21□□□□□ -0.29
PFDN1-206ENST00000514611 ANKRD66B4E2M5 251 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 APOL1O14791 398 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 HGSO14964 777 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-206ENST00000514611 MFAP3LO75121 409 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 KRT1P04264 644 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 PIRTP0C851 137 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 THRAP10827 490 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 FGF3P11487 239 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-206ENST00000514611 ACP5P13686 325 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 FASLGP48023 281 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 LIMK2P53671 638 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 AP1B1Q10567 949 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 PEX6Q13608 980 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 LRP8Q14114 963 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 TRIM14Q14142 442 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 PCSK7Q16549 785 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 MANEAQ5SRI9 462 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 ZNF648Q5T619 568 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-206ENST00000514611 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 KDELC2Q7Z4H8 507 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 DTX1Q86Y01 620 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 SFRP1Q8N474 314 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 OR4D9Q8NGE8 314 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-206ENST00000514611 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 OLFM3Q96PB7 478 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 TRIB3Q96RU7 358 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 AKAP7Q9P0M2 348 aaPredicted RBP13.2□□□□□ -0.3
PFDN1-206ENST00000514611 SEPT10Q9P0V9 454 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 VPS18Q9P253 973 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 TBC1D29Q9UFV1 150 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 ZNHIT2Q9UHR6 403 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 HYOU1Q9Y4L1 999 aa13.2□□□□□ -0.3
PFDN1-206ENST00000514611 ZW10O43264 779 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 TNNT1P13805 278 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 NOP2P46087 812 aaKnown RBP13.19□□□□□ -0.3
PFDN1-206ENST00000514611 PPM1FP49593 454 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-206ENST00000514611 DYNLT1P63172 113 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 HHEXQ03014 270 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 CLPPQ16740 277 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-206ENST00000514611 RFX6Q8HWS3 928 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 VSTM4Q8IW00 320 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 RAVER1Q8IY67 606 aaKnown RBP13.19□□□□□ -0.3
PFDN1-206ENST00000514611 RNF25Q96BH1 459 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-206ENST00000514611 SGF29Q96ES7 293 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 SLC38A3Q99624 504 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 FAM83DQ9H4H8 585 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 NHEJ1Q9H9Q4 299 aaPredicted RBP13.19□□□□□ -0.3
PFDN1-206ENST00000514611 ZNHIT6Q9NWK9 470 aaKnown RBP13.19□□□□□ -0.3
PFDN1-206ENST00000514611 SHOC2Q9UQ13 582 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
PFDN1-206ENST00000514611 GCN1Q92616 2671 aaKnown RBP13.18□□□□□ -0.3
PFDN1-206ENST00000514611 ARHGEF17Q96PE2 2063 aaPredicted RBP13.18□□□□□ -0.3
PFDN1-206ENST00000514611 A6NCN8 305 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 ZNF487B1APH4 448 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 SNX2O60749 519 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 MTA2O94776 668 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 MT-CYBP00156 380 aaPredicted RBP13.18□□□□□ -0.3
PFDN1-206ENST00000514611 CYP4F2P78329 520 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 GPLD1P80108 840 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 NFATC2Q13469 925 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 TRA2AQ13595 282 aaKnown RBP eCLIP13.18□□□□□ -0.3
PFDN1-206ENST00000514611 LINC00303Q3SY05 128 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 ZNF569Q5MCW4 686 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.18□□□□□ -0.3
PFDN1-206ENST00000514611 NT5DC3Q86UY8 548 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 FAM129CQ86XR2 697 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 RHOT2Q8IXI1 618 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 RNF214Q8ND24 703 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 GPR26Q8NDV2 337 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 SPATA22Q8NHS9 363 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 CCHCR1Q8TD31 782 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 EXTL1Q92935 676 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 ART4Q93070 314 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 IMP4Q96G21 291 aaKnown RBP13.18□□□□□ -0.3
PFDN1-206ENST00000514611 MED8Q96G25 268 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 CCDC42Q96M95 316 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 SPATA16Q9BXB7 569 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 MAK16Q9BXY0 300 aaKnown RBP13.18□□□□□ -0.3
PFDN1-206ENST00000514611 ADGRE3Q9BY15 652 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 ZFYVE1Q9HBF4 777 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 OCIAD1Q9NX40 245 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 ATXN10Q9UBB4 475 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 ZNF711Q9Y462 761 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 PCDHB11Q9Y5F2 797 aa13.18□□□□□ -0.3
PFDN1-206ENST00000514611 EFCAB7A8K855 629 aa13.17□□□□□ -0.3
PFDN1-206ENST00000514611 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms