RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CIB2O75838 187 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 AFF1P51825 1210 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 HNRNPFP52597 415 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 BCAT1P54687 386 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 NUP107P57740 925 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PPIDQ08752 370 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MDH1BQ5I0G3 518 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 AARS2Q5JTZ9 985 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 FIP1L1Q6UN15 594 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 C16orf89Q6UX73 402 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 RFX8Q6ZV50 586 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 OTOP3Q7RTS5 596 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 BTLAQ7Z6A9 289 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PATL1Q86TB9 770 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 ZDHHC17Q8IUH5 632 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 CADM3Q8N126 398 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MINDY2Q8NBR6 621 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 ANKK1Q8NFD2 765 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 OR6B3Q8NGW1 331 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 KCTD13Q8WZ19 329 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MUL1Q969V5 352 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 EME1Q96AY2 570 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 YIPF6Q96EC8 236 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 SNX15Q9NRS6 342 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 ASNSD1Q9NWL6 643 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 GDE1Q9NZC3 331 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 DTLQ9NZJ0 730 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 ZC3H7BQ9UGR2 993 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 FBXO10Q9UK96 956 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 INSL5Q9Y5Q6 135 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 CDY1Q9Y6F8 540 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 NUP210LQ5VU65 1888 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 OBSL1O75147 1896 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 NT5C1B-RDH14C9J2C7 533 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 H0YAE9 185 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 SPTLC1O15269 473 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 TGM5O43548 720 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 BMP1P13497 986 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 ATP6V1B2P21281 511 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 CTHP32929 405 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 OR1D2P34982 312 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MLLT6P55198 1093 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 TMPRSS15P98073 1019 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MPP1Q00013 466 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 SELENBP1Q13228 472 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 FGD3Q5JSP0 725 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 GRTP1Q5TC63 336 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 AFMIDQ63HM1 303 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM53Q6P2H8 277 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 RETREG3Q86VR2 466 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 TMEM173Q86WV6 379 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MINDY1Q8N5J2 469 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 SMRP1Q8NCR6 262 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PNPT1Q8TCS8 783 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 JPH3Q8WXH2 748 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MFSD3Q96ES6 412 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 HSFY1Q96LI6 401 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PRPF18Q99633 342 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 OLFM1Q99784 485 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 CPNE1Q99829 537 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 GATA5Q9BWX5 397 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 NAA50Q9GZZ1 169 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 DDX18Q9NVP1 670 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 GTSE1Q9NYZ3 720 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 IL37Q9NZH6 218 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 TRAF6Q9Y4K3 522 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 UGT2A1Q9Y4X1 527 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MAGED1Q9Y5V3 778 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 HCFC2Q9Y5Z7 792 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PRRT4C9JH25 899 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 UBFD1O14562 309 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 SUPT7LO94864 414 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 SLC34A2O95436 690 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 ADRA1AP35348 466 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 IRF9Q00978 393 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 SMAD2Q15796 467 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PPM1JQ5JR12 505 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 C19orf48Q6RUI8 117 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 TRIM67Q6ZTA4 783 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MILR1Q7Z6M3 343 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 LGI2Q8N0V4 545 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 KYQ8NBH2 561 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 BHLHE22Q8NFJ8 381 aaPredicted RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PPP1R14CQ8TAE6 165 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 STARD8Q92502 1023 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PHF12Q96QT6 1004 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 PAAF1Q9BRP4 392 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 CNPY3Q9BT09 278 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 WDR6Q9NNW5 1121 aaKnown RBP7.39□□□□□ -1.23
CLIP1-205ENST00000514271 RRN3Q9NYV6 651 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 APPL1Q9UKG1 709 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 COQ6Q9Y2Z9 468 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 YIPF1Q9Y548 306 aa7.39□□□□□ -1.23
CLIP1-205ENST00000514271 MAGEB16A2A368 324 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 WDR27A2RRH5 827 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 PRRG1O14668 218 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 SCO2O43819 266 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 B3GALNT1O75752 331 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 DNAJB5O75953 348 aa7.38□□□□□ -1.23
CLIP1-205ENST00000514271 VAPBO95292 243 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms