RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 MRNIPQ6NTE8 343 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 PSAPL1Q6NUJ1 521 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 CILP2Q8IUL8 1156 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 PIANPQ8IYJ0 282 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 PELI3Q8N2H9 469 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 DENND6BQ8NEG7 585 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 GABPB2Q8TAK5 448 aaPredicted RBP12.45□□□□□ -0.42
PDPN-210ENST00000513143 SCG3Q8WXD2 468 aaKnown RBP12.45□□□□□ -0.42
PDPN-210ENST00000513143 BIRC7Q96CA5 298 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 VPS35Q96QK1 796 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 AGAP2Q99490 1192 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A7Q9HAW7 530 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A10Q9HAW8 530 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A8Q9HAW9 530 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 CATSPERZQ9NTU4 200 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 SMOXQ9NWM0 555 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 MARCH4Q9P2E8 410 aaPredicted RBP12.45□□□□□ -0.42
PDPN-210ENST00000513143 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.45□□□□□ -0.42
PDPN-210ENST00000513143 SPAG17Q6Q759 2223 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 K7ESM1 405 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 DYNC1I1O14576 645 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 GPR39O43194 453 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 FSBPO95073 299 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 SHBGP04278 402 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 PRSS56P0CW18 603 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 OGNP20774 298 aaKnown RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 BCKDHBP21953 392 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 HNRNPA2B1P22626 353 aaKnown RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 CA5AP35218 305 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 TRIM23P36406 574 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 GPR1P46091 355 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 CDKN1CP49918 316 aaPredicted RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 RPL6Q02878 288 aaKnown RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 NAB1Q13506 487 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 SEMA3AQ14563 771 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 STAT4Q14765 748 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 EFTUD2Q15029 972 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDPN-210ENST00000513143 IRF4Q15306 451 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 TYSND1Q2T9J0 566 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 KLHL38Q2WGJ6 581 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 AARS2Q5JTZ9 985 aaKnown RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 LYPLAL1Q5VWZ2 237 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 ZNF470Q6ECI4 717 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 PNCKQ6P2M8 343 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 ADAMTSL4Q6UY14 1074 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 CERS6Q6ZMG9 384 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 KIAA0408Q6ZU52 694 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 MARK2Q7KZI7 788 aaKnown RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 GALNT7Q86SF2 657 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 SDCCAG8Q86SQ7 713 aaPredicted RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 SLC26A11Q86WA9 606 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 DENND6AQ8IWF6 608 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 IQCKQ8N0W5 287 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 PLA2G15Q8NCC3 412 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 C2CD4AQ8NCU7 369 aaPredicted RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 BTN2A2Q8WVV5 523 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.44□□□□□ -0.42
PDPN-210ENST00000513143 ULK4Q96C45 1275 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 TCF12Q99081 682 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 CCDC77Q9BR77 488 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 DUSP15Q9H1R2 295 aaPredicted RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 FAM96AQ9H5X1 160 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 EBF2Q9HAK2 575 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 MBNL1Q9NR56 388 aaKnown RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 NSMCE4AQ9NXX6 385 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 ZFATQ9P243 1243 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 VPS18Q9P253 973 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 FETUBQ9UGM5 382 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 FBXO5Q9UKT4 447 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 TMPRSS11EQ9UL52 423 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 CNOT6Q9ULM6 557 aaKnown RBP12.44□□□□□ -0.42
PDPN-210ENST00000513143 DMTF1Q9Y222 760 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 ZNF318Q5VUA4 2279 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 PIKFYVEQ9Y2I7 2098 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 GON4LQ3T8J9 2241 aa12.44□□□□□ -0.42
PDPN-210ENST00000513143 A0A1W2PPC4 97 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 PIAS1O75925 651 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 S1PR4O95977 384 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 PCCBP05166 539 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 SP9P0CG40 484 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 AKT2P31751 481 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 IGFALSP35858 605 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 PPARGP37231 505 aaPredicted RBP12.43□□□□□ -0.42
PDPN-210ENST00000513143 SLC1A2P43004 574 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 TTPAP49638 278 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 CTBP1Q13363 440 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 CASP8Q14790 479 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 ANGPT1Q15389 498 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 RAET1GQ6H3X3 334 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 TAS2R42Q7RTR8 314 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 C11orf74Q86VG3 221 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 SERPINA9Q86WD7 417 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 LRRC6Q86X45 466 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 SLC41A1Q8IVJ1 513 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 CTAGE3PQ8IX95 158 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 NXPE1Q8N323 547 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 PPM1NQ8N819 430 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 TMEM145Q8NBT3 493 aa12.43□□□□□ -0.42
PDPN-210ENST00000513143 GAB3Q8WWW8 586 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms