RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 DEFB133Q30KQ1 61 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 SFRP5Q5T4F7 317 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 PPP1R2P3Q6NXS1 205 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 CRTC3Q6UUV7 619 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 IRF2BP2Q7Z5L9 587 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 DNAAF5Q86Y56 855 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 WDR75Q8IWA0 830 aaKnown RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 PPIL6Q8IXY8 311 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 RBFAQ8N0V3 343 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 TP53I13Q8NBR0 393 aaPredicted RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 MAPK15Q8TD08 544 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 WFDC12Q8WWY7 111 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 FGF11Q92914 225 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 UTP4Q969X6 686 aaKnown RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 CELF6Q96J87 481 aaKnown RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 COX4I2Q96KJ9 171 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 IL12RB2Q99665 862 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 CPEB1Q9BZB8 566 aaKnown RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 ABCG4Q9H172 646 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 TCEAL2Q9H3H9 227 aaPredicted RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 DHX35Q9H5Z1 703 aaKnown RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 LRRC19Q9H756 370 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 MBNL1Q9NR56 388 aaKnown RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 DONSONQ9NYP3 566 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 SPASTQ9UBP0 616 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 DKK3Q9UBP4 350 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 APOBEC3BQ9UH17 382 aaKnown RBP9.5□□□□□ -0.89
TRIO-220ENST00000512979 MYO6Q9UM54 1294 aa9.5□□□□□ -0.89
TRIO-220ENST00000512979 SHISA3A0PJX4 238 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 CPED1A4D0V7 1026 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 ARHGAP42A6NI28 874 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 LRRC53A6NM62 1247 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 J3KR12 359 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 CSO75390 466 aaKnown RBP9.49□□□□□ -0.89
TRIO-220ENST00000512979 MPOP05164 745 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 GSNP06396 782 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 ACTN2P35609 894 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 SUOXP51687 545 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 NDST2P52849 883 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 ADKP55263 362 aaKnown RBP9.49□□□□□ -0.89
TRIO-220ENST00000512979 YPEL5P62699 121 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 ELP6Q0PNE2 266 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 C1orf61Q13536 156 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 IRF4Q15306 451 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 NR0B2Q15466 257 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 NFKBIBQ15653 356 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 ASIC2Q16515 512 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 CA9Q16790 459 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 TBC1D25Q3MII6 688 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 TMEM52BQ4KMG9 183 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 ANO6Q4KMQ2 910 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 CFAP58Q5T655 872 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 FAXCQ5TGI0 409 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 PLEKHA7Q6IQ23 1121 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 GUSBP11Q6P575 273 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 ABHD17CQ6PCB6 329 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 MACC1Q6ZN28 852 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 EFL1Q7Z2Z2 1120 aaKnown RBP9.49□□□□□ -0.89
TRIO-220ENST00000512979 MTDHQ86UE4 582 aaKnown RBP9.49□□□□□ -0.89
TRIO-220ENST00000512979 OR2W6PQ8NHA6 318 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 VCPIP1Q96JH7 1222 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 BBC3Q96PG8 261 aaPredicted RBP9.49□□□□□ -0.89
TRIO-220ENST00000512979 SYT11Q9BT88 431 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 LRRC61Q9BV99 259 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 SLC13A1Q9BZW2 595 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 SLC39A8Q9C0K1 460 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 IFT22Q9H7X7 185 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 PDFQ9HBH1 243 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 PARVAQ9NVD7 372 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 NCKIPSDQ9NZQ3 722 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 SAMD15Q9P1V8 674 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 PCSK1NQ9UHG2 260 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 PNMA8BQ9ULN7 279 aaPredicted RBP9.49□□□□□ -0.89
TRIO-220ENST00000512979 COQ6Q9Y2Z9 468 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 ST14Q9Y5Y6 855 aa9.49□□□□□ -0.89
TRIO-220ENST00000512979 MYLKQ15746 1914 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 TSPAN11A1L157 253 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 EME2A4GXA9 379 aaPredicted RBP9.48□□□□□ -0.89
TRIO-220ENST00000512979 EIF4E1BA6NMX2 242 aaKnown RBP9.48□□□□□ -0.89
TRIO-220ENST00000512979 EIF3CLB5ME19 914 aaKnown RBP9.48□□□□□ -0.89
TRIO-220ENST00000512979 DFFAO00273 331 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 TOR1BO14657 336 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 TPP1O14773 563 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 AURKAO14965 403 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 MUSKO15146 869 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 DAPK3O43293 454 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 BUB1BO60566 1050 aaPredicted RBP9.48□□□□□ -0.89
TRIO-220ENST00000512979 PRAMEF11O60813 436 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 USP12O75317 370 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 GCATO75600 419 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 WFS1O76024 890 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 PRKCGP05129 697 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 ANXA6P08133 673 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 C6P13671 934 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 TGM2P21980 687 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 PAPOLAP51003 745 aaKnown RBP9.48□□□□□ -0.89
TRIO-220ENST00000512979 SCNN1BP51168 640 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 NEK2P51955 445 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 PPARDQ03181 441 aa9.48□□□□□ -0.89
TRIO-220ENST00000512979 CCDC173Q0VFZ6 552 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms