RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 CASP1P29466 404 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 CLCN1P35523 988 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 PDIA5Q14554 519 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 STXBP5Q5T5C0 1151 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 NPAS4Q8IUM7 802 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 MAPK15Q8TD08 544 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 ABCB10Q9NRK6 738 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 HAO2Q9NYQ3 351 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 AGO1Q9UL18 857 aaKnown RBP8.9□□□□□ -0.98
VCAN-208ENST00000512590 PCDHGB1Q9Y5G3 927 aa8.9□□□□□ -0.98
VCAN-208ENST00000512590 TCRBV21S2A2A0A5A6 115 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 E7EQ34 232 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 SLCO1B7G3V0H7 640 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 OR1F1O43749 312 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 RECQL4O94761 1208 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 C8AP07357 584 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 OR12D1P0DN82 309 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 CD86P42081 329 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 TTPAP49638 278 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 EPHA4P54764 986 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 PPP2R2AP63151 447 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 ELOCQ15369 112 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 WASHC2DQ5SRD0 308 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 STEAP3Q658P3 488 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 EMBQ6PCB8 327 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 ARL9Q6T311 187 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 ZNF730Q6ZMV8 503 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 ZNF589Q86UQ0 364 aaPredicted RBP8.9□□□□□ -0.99
VCAN-208ENST00000512590 TCEANCQ8N8B7 351 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 SETD9Q8NE22 299 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 OR6K2Q8NGY2 324 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 CRISPLD1Q9H336 500 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 TRIM39Q9HCM9 518 aa8.9□□□□□ -0.99
VCAN-208ENST00000512590 ADAMTS3O15072 1205 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 CNTN5O94779 1100 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 MT-CO1P00395 513 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 UGT2B4P06133 528 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ZNF3P17036 446 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 SRP14P37108 136 aaKnown RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 HK2P52789 917 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 INO80DQ53TQ3 878 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 PPP1R26Q5T8A7 1209 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 RESP18Q5W5W9 173 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ZNF470Q6ECI4 717 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 MZT2BQ6NZ67 158 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 APTXQ7Z2E3 356 aaKnown RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 ZNF615Q8N8J6 731 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 FCRL4Q96PJ5 515 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 COPS8Q99627 209 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 GPRC5BQ9NZH0 403 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 BORCS7-ASMTA0A0B4J1R7 106 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 PSTPIP1O43586 416 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 FHP07954 510 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 GRK5P34947 590 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 GMFBP60983 142 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 PTPN11Q06124 597 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 DUSP4Q13115 394 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 CYP27C1Q4G0S4 372 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 FAM151BQ6UXP7 276 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 LRRC8AQ8IWT6 810 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 TMEM161BQ8NDZ6 487 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 PHF10Q8WUB8 498 aaKnown RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 RXFP2Q8WXD0 754 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 BORCS7Q96B45 105 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 SAMD11Q96NU1 681 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ULBP1Q9BZM6 244 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 MRPS30Q9NP92 439 aaKnown RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 BLOC1S4Q9NUP1 217 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 AP3M1Q9Y2T2 418 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 RIIAD1A6NNX1 92 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 TLR5O60602 858 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 KAT7O95251 611 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 FASLGP48023 281 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 SRYQ05066 204 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 BNIP2Q12982 314 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 WSCD1Q658N2 575 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 WDR59Q6PJI9 974 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 C16orf86Q6ZW13 317 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 TMPRSS11BQ86T26 416 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 GHDCQ8N2G8 530 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 PIK3C3Q8NEB9 887 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 WFIKKN2Q8TEU8 576 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 TRAPPC12Q8WVT3 735 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 KAT5Q92993 513 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 NXPE2Q96DL1 559 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 CCDC115Q96NT0 180 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 POFUT2Q9Y2G5 429 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ELOA3DA6NLF2 546 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 ATMINO43313 823 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 PRICKLE3O43900 615 aaPredicted RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 UGT2B17O75795 530 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 TCF4P15884 667 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 OGNP20774 298 aaKnown RBP8.89□□□□□ -0.99
VCAN-208ENST00000512590 OR3A3P47888 321 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 OR3A2P47893 321 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 HYAL2Q12891 473 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 LAPTM5Q13571 262 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 BLMHQ13867 455 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ELOA3BQ3SY89 546 aa8.89□□□□□ -0.99
VCAN-208ENST00000512590 ELOA2Q8IYF1 753 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms