RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 PYCR3Q53H96 274 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 C3orf38Q5JPI3 329 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 OGFOD3Q6PK18 319 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 RBM44Q6ZP01 1051 aaKnown RBP13.19□□□□□ -0.3
RNF4-215ENST00000511843 TMC3Q7Z5M5 1100 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 CACTIN-AS1Q8N1I8 211 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 ZDHHC1Q8WTX9 485 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
RNF4-215ENST00000511843 MRGPRX2Q96LB1 330 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 FCRL5Q96RD9 977 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 SPATA16Q9BXB7 569 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 GSDMCQ9BYG8 508 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 FOXP3Q9BZS1 431 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 MAGEE1Q9HCI5 957 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 TRNAU1APQ9NX07 287 aaKnown RBP13.19□□□□□ -0.3
RNF4-215ENST00000511843 ZNHIT2Q9UHR6 403 aa13.19□□□□□ -0.3
RNF4-215ENST00000511843 ATXN7L1Q9ULK2 861 aaPredicted RBP13.19□□□□□ -0.3
RNF4-215ENST00000511843 TRBV23OR9-2A0A075B6M9 112 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 LOC285095A0A1B0GVY8 99 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 TCRBV7S2A1N4TA0A589 114 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 KCNN4O15554 427 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 DNAJC6O75061 913 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 MTX2O75431 263 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 ECEL1O95672 775 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 EML2O95834 649 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 BPIP17213 487 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 PTPN7P35236 360 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 XRCC4Q13426 336 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 CERCAMQ5T4B2 595 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 DARS2Q6PI48 645 aaKnown RBP13.18□□□□□ -0.3
RNF4-215ENST00000511843 FOXR1Q6PIV2 292 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 CHST15Q7LFX5 561 aaPredicted RBP13.18□□□□□ -0.3
RNF4-215ENST00000511843 NLRP8Q86W28 1048 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 GALNT13Q8IUC8 556 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 CCDC110Q8TBZ0 833 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 SCARF2Q96GP6 870 aaPredicted RBP13.18□□□□□ -0.3
RNF4-215ENST00000511843 CALR3Q96L12 384 aaKnown RBP13.18□□□□□ -0.3
RNF4-215ENST00000511843 GFM1Q96RP9 751 aaKnown RBP13.18□□□□□ -0.3
RNF4-215ENST00000511843 APOL2Q9BQE5 337 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 FICDQ9BVA6 458 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 CDH19Q9H159 772 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 OR2AG1Q9H205 316 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 GBA3Q9H227 469 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 LRIT1Q9P2V4 623 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 SATB2Q9UPW6 733 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 EFR3BQ9Y2G0 817 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 R3HDM2Q9Y2K5 976 aaKnown RBP13.18□□□□□ -0.3
RNF4-215ENST00000511843 ADGRG1Q9Y653 693 aa13.18□□□□□ -0.3
RNF4-215ENST00000511843 ITPR1Q14643 2758 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 GOLGA6L6A8MZA4 724 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 D6RAR5 112 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
RNF4-215ENST00000511843 GPR39O43194 453 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 AGTP01019 485 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 PYGLP06737 847 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 ACP5P13686 325 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 GLB1P16278 677 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 PSMB4P28070 264 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 SLC1A5Q15758 541 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 PLA2G4EQ3MJ16 856 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
RNF4-215ENST00000511843 ZNF569Q5MCW4 686 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 ANKRD20A2Q5SQ80 823 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 ANKRD20A1Q5TYW2 823 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 ANKRD20A3Q5VUR7 823 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 CRTC3Q6UUV7 619 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 TMPRSS9Q7Z410 1059 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 ZNF761Q86XN6 746 aaPredicted RBP13.17□□□□□ -0.3
RNF4-215ENST00000511843 CDKL3Q8IVW4 592 aaPredicted RBP13.17□□□□□ -0.3
RNF4-215ENST00000511843 NAGSQ8N159 534 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 TTC30BQ8N4P2 665 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 BLOC1S5Q8TDH9 187 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 CRELD1Q96HD1 420 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 VAT1Q99536 393 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 LRRN3Q9H3W5 708 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 ATXN10Q9UBB4 475 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 TRHDEQ9UKU6 1024 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 GUCA1BQ9UMX6 200 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 KCNK6Q9Y257 313 aa13.17□□□□□ -0.3
RNF4-215ENST00000511843 TCEA3O75764 348 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 TJP3O95049 919 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
RNF4-215ENST00000511843 ZNF8P17098 575 aaPredicted RBP13.16□□□□□ -0.3
RNF4-215ENST00000511843 ITPKBP27987 946 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 CA5AP35218 305 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 CETN2P41208 172 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 OR1D5P58170 312 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 DCDC1P59894 354 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 SPARCL1Q14515 664 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 PTPRCAPQ14761 206 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 AMZ1Q400G9 498 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 GLT6D1Q7Z4J2 308 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 RAVER1Q8IY67 606 aaKnown RBP13.16□□□□□ -0.3
RNF4-215ENST00000511843 SYCE1Q8N0S2 351 aa13.16□□□□□ -0.3
RNF4-215ENST00000511843 ARL14Q8N4G2 192 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms