RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 ARFGAP1Q8N6T3 406 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 Q8NA96 180 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 SCRN2Q96FV2 425 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 C9orf72Q96LT7 481 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 CNPY3Q9BT09 278 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 MLXIPLQ9NP71 852 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 ERRFI1Q9UJM3 462 aaPredicted RBP18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 PHTF1Q9UMS5 762 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 AP4E1Q9UPM8 1137 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 PCDHGA6Q9Y5G7 932 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 F8P00451 2351 aa18.83■□□□□ 0.6
HMGCS1-206ENST00000511774 SETD2Q9BYW2 2564 aaPredicted RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 NDUFA10O95299 355 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 CYP2A6P11509 494 aaPredicted RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 TNFRSF8P28908 595 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 LEPRP48357 1165 aaKnown RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 SEPHS1P49903 392 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 AIF1P55008 147 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 JAM2P57087 298 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 MAXP61244 160 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 RPS18P62269 152 aaKnown RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 LRP8Q14114 963 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 INPP5JQ15735 1006 aaPredicted RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 CYP4V2Q6ZWL3 525 aaPredicted RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 CHST15Q7LFX5 561 aaPredicted RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 PIH1D2Q8WWB5 315 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 AP2M1Q96CW1 435 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 STAMBPL1Q96FJ0 436 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 OR6C1Q96RD1 312 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 DHX35Q9H5Z1 703 aaKnown RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 IGSF5Q9NSI5 407 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 ZNHIT2Q9UHR6 403 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 CNOT6Q9ULM6 557 aaKnown RBP18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 SLC30A1Q9Y6M5 507 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 CELSR1Q9NYQ6 3014 aa18.82■□□□□ 0.6
HMGCS1-206ENST00000511774 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 KIF1CO43896 1103 aaKnown RBP18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 PGLSO95336 258 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 DDAH2O95865 285 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 LDLRP01130 860 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 PDHA1P08559 390 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 TYRP1P17643 537 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 HTR7P34969 479 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 NSFP46459 744 aaKnown RBP18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 PTSQ03393 145 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 IHHQ14623 411 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 CAMK4Q16566 473 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 TMCO4Q5TGY1 634 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 LRRC66Q68CR7 880 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 RFX8Q6ZV50 586 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 LYSMD3Q7Z3D4 306 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 NUDCD1Q96RS6 583 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 WDR24Q96S15 920 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 ACTL8Q9H568 366 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 SCHIP1Q9P0W5 487 aaPredicted RBP18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 CPNE7Q9UBL6 633 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 PPIL1Q9Y3C6 166 aa18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 DIDO1Q9BTC0 2240 aaKnown RBP18.81■□□□□ 0.6
HMGCS1-206ENST00000511774 ADGRG4Q8IZF6 3080 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 SNX2O60749 519 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 SPAG6O75602 509 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 ASMTLO95671 621 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 ACP5P13686 325 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 SOX5P35711 763 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 RENBPP51606 427 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 UBE2IP63279 158 aaKnown RBP18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 LAMB3Q13751 1172 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 C1QL3Q5VWW1 255 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 DNAJC24Q6P3W2 148 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 TRIM72Q6ZMU5 477 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 SLC9B2Q86UD5 537 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 PLXDC1Q8IUK5 500 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 RASGRP3Q8IV61 690 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 SRRM1Q8IYB3 904 aaKnown RBP18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 PRR7Q8TB68 274 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 SNRNP25Q9BV90 132 aaKnown RBP18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 RIOK2Q9BVS4 552 aaKnown RBP18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 NLRC4Q9NPP4 1024 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 CNOT8Q9UFF9 292 aaKnown RBP18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 LNPEPQ9UIQ6 1025 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 KCND3Q9UK17 655 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 PDZD2O15018 2839 aa18.8■□□□□ 0.6
HMGCS1-206ENST00000511774 POLEQ07864 2286 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 LILRA5A6NI73 299 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 PES1O00541 588 aaKnown RBP18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 CALB1P05937 261 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 F3P13726 295 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 PGDP52209 483 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 POLR2FP61218 127 aaKnown RBP18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 IL10RAQ13651 578 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 TPD52L1Q16890 204 aaPredicted RBP18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 SH3KBP1Q96B97 665 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 TGM7Q96PF1 710 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 PLEKHG4BQ96PX9 1271 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 MGME1Q9BQP7 344 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 SLC25A23Q9BV35 468 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 LHX9Q9NQ69 397 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 ETNK2Q9NVF9 386 aa18.79■□□□□ 0.6
HMGCS1-206ENST00000511774 SPTBP11277 2137 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms