RNA–Protein interactions for RNA: ENST00000511752.5

PTCD2-209, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 3

Gene PTCD2, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-209ENST00000511752 SLC35F6Q8N357 371 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 ARL10Q8N8L6 244 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 NAT6Q93015 286 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
PTCD2-209ENST00000511752 OR2M4Q96R27 311 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 RMI1Q9H9A7 625 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 ARNT2Q9HBZ2 717 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 IL17CQ9P0M4 197 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 KLK13Q9UKR3 277 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 DRG1Q9Y295 367 aaKnown RBP12.39□□□□□ -0.43
PTCD2-209ENST00000511752 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
PTCD2-209ENST00000511752 LY6G6EA0A0G2JKS1 128 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 CPED1A4D0V7 1026 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 EME2A4GXA9 379 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 ERI2A8K979 691 aaKnown RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 E7EVH7 732 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 USP12O75317 370 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 AP2A1O95782 977 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 FUCA1P04066 466 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 LPOP22079 712 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 LMAN1P49257 510 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 OLIG2Q13516 323 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 SPARCL1Q14515 664 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 KCTD11Q693B1 232 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 MARK2Q7KZI7 788 aaKnown RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 GSTA5Q7RTV2 222 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 TMPRSS7Q7RTY8 843 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 LINC00523Q86TU6 105 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 TMPRSS12Q86WS5 348 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 SLC35F3Q8IY50 421 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 RASGEF1CQ8N431 466 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 TAB3Q8N5C8 712 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 FAM46DQ8NEK8 389 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 CCL4L1Q8NHW4 92 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 IFI44Q8TCB0 444 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 DTX3LQ8TDB6 740 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 BRSK1Q8TDC3 778 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 GPBAR1Q8TDU6 330 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 GLYATL1Q969I3 302 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 NAP1L3Q99457 506 aaPredicted RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 SIRPGQ9P1W8 387 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 PAK5Q9P286 719 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 GULP1Q9UBP9 304 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 ZNHIT2Q9UHR6 403 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 CNOT6Q9ULM6 557 aaKnown RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 PADI4Q9UM07 663 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 MSRB2Q9Y3D2 182 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 U3KQA8 63 aa12.38□□□□□ -0.43
PTCD2-209ENST00000511752 ZNF106Q9H2Y7 1883 aaKnown RBP12.38□□□□□ -0.43
PTCD2-209ENST00000511752 GLYATL1P3A0A0U1RQE8 302 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 FAM221BA6H8Z2 402 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 BUD23O43709 281 aaKnown RBP12.37□□□□□ -0.43
PTCD2-209ENST00000511752 DNAJC6O75061 913 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 GAS8O95995 478 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 MYF5P13349 255 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 ADCY8P40145 1251 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 CTBSQ01459 385 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 ITGA9Q13797 1035 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 LRP8Q14114 963 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 SMAD1Q15797 465 aaKnown RBP12.37□□□□□ -0.43
PTCD2-209ENST00000511752 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 SLC30A9Q6PML9 568 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 C4orf22Q6V702 233 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 EFL1Q7Z2Z2 1120 aaKnown RBP12.37□□□□□ -0.43
PTCD2-209ENST00000511752 KYQ8NBH2 561 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 OR6C4Q8NGE1 309 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 GDAP1Q8TB36 358 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
PTCD2-209ENST00000511752 VPS35Q96QK1 796 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 C19orf43Q9BQ61 176 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 DPEP2Q9H4A9 486 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 TRIM39Q9HCM9 518 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 IL26Q9NPH9 171 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 ARL5AQ9Y689 179 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 OAS3Q9Y6K5 1087 aaKnown RBP12.37□□□□□ -0.43
PTCD2-209ENST00000511752 SPTBN2O15020 2390 aa12.37□□□□□ -0.43
PTCD2-209ENST00000511752 B4DGG1 531 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 PGRMC1O00264 195 aaKnown RBP12.36□□□□□ -0.43
PTCD2-209ENST00000511752 VEGFDO43915 354 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 NUAK1O60285 661 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 JUPP14923 745 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 AK4P27144 223 aaPredicted RBP12.36□□□□□ -0.43
PTCD2-209ENST00000511752 ACTR1BP42025 376 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 ACTR1AP61163 376 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 GTF2H3Q13889 308 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 ATP13A5Q4VNC0 1218 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 HES3Q5TGS1 186 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 OGFOD3Q6PK18 319 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 FAM151BQ6UXP7 276 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 NRROSQ86YC3 692 aa12.36□□□□□ -0.43
PTCD2-209ENST00000511752 DNAAF3Q8N9W5 541 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms