RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 GOLGA6L4A6NEF3 574 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 MUSKO15146 869 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 AQP9O43315 295 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 KATNA1O75449 491 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 GCATO75600 419 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 GNA14O95837 355 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 CD160O95971 181 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 NTRK1P04629 796 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 FLT3P36888 993 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 SULT1E1P49888 294 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 SERPINH1P50454 418 aaKnown RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 CCNHP51946 323 aaPredicted RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 UCNP55089 124 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 RNASE9P60153 205 aaKnown RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 RPS21P63220 83 aaKnown RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 SLC6A3Q01959 620 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 EIF2B5Q13144 721 aaKnown RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 C1orf61Q13536 156 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 PDE1CQ14123 709 aaPredicted RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 RAB6CQ53S08 254 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 C2CD6Q53TS8 623 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 LRRC73Q5JTD7 316 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 BRMS1LQ5PSV4 323 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 BROXQ5VW32 411 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 KIAA1161Q6NSJ0 714 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 ENOSF1Q7L5Y1 443 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 SLC35F3Q8IY50 421 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 RAVER1Q8IY67 606 aaKnown RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 LSMEM2Q8N112 164 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 ANKS4BQ8N8V4 417 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 ZNF397Q8NF99 534 aaPredicted RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 LMX1AQ8TE12 382 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 CHTF18Q8WVB6 975 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 SNRNP27Q8WVK2 155 aaKnown RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 PPP1R9BQ96SB3 815 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 TM6SF2Q9BZW4 377 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 RAB6CQ9H0N0 254 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 ABCG4Q9H172 646 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 ZDHHC6Q9H6R6 413 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 WDCPQ9H6R7 721 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 SIX2Q9NPC8 291 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 B4GALT6Q9UBX8 382 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 ACSL6Q9UKU0 697 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 HS3ST3A1Q9Y663 406 aa6.73□□□□□ -1.33
COPS4-209ENST00000511653 ZFC3H1O60293 1989 aaKnown RBP6.73□□□□□ -1.33
COPS4-209ENST00000511653 LRBAP50851 2863 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 EME2A4GXA9 379 aaPredicted RBP6.72□□□□□ -1.33
COPS4-209ENST00000511653 NEMP2A6NFY4 417 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 IGLON5A6NGN9 336 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 DRGXA6NNA5 263 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 CDRT15L2A8MXV6 281 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 H7BY64 318 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 ZNF561-AS1K7EIQ3 104 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 DVL2O14641 736 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 C6P13671 934 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 KRT15P19012 456 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 OR1E1P30953 314 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 ACVRL1P37023 503 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 RECQLP46063 649 aaPredicted RBP6.72□□□□□ -1.33
COPS4-209ENST00000511653 RABIFP47224 123 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 DUSP3P51452 185 aaPredicted RBP6.72□□□□□ -1.33
COPS4-209ENST00000511653 DNA2P51530 1060 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 PFN3P60673 137 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 DEUP1Q05D60 604 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 SRSF6Q13247 344 aaKnown RBP6.72□□□□□ -1.33
COPS4-209ENST00000511653 PLCL1Q15111 1095 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 RBM44Q6ZP01 1051 aaKnown RBP6.72□□□□□ -1.33
COPS4-209ENST00000511653 B3GNT8Q7Z7M8 397 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 SETD3Q86TU7 594 aaPredicted RBP6.72□□□□□ -1.33
COPS4-209ENST00000511653 FAM131BQ86XD5 332 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 IRF2BP1Q8IU81 584 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 DRC7Q8IY82 874 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 NT5C3BQ969T7 300 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 WBP1Q96G27 269 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 PPP1R16AQ96I34 528 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 SLC46A1Q96NT5 459 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 LRRC61Q9BV99 259 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 DPH1Q9BZG8 443 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 SYNCQ9H7C4 482 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 USP29Q9HBJ7 922 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 SPTLC3Q9NUV7 552 aa6.72□□□□□ -1.33
COPS4-209ENST00000511653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.72□□□□□ -1.33
COPS4-209ENST00000511653 ILVBLA1L0T0 632 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 C16orf96A6NNT2 1141 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 B8ZZF3 427 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 K7ENP7 123 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 FOXN3O00409 490 aaPredicted RBP6.71□□□□□ -1.33
COPS4-209ENST00000511653 AP1G1O43747 822 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 SRGAP2O75044 1071 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 HPXP02790 462 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 NAT1P18440 290 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 PON1P27169 355 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 RBMS1P29558 406 aaKnown RBP6.71□□□□□ -1.33
COPS4-209ENST00000511653 PPP1R2P41236 205 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 GNA12Q03113 381 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 CCDC15Q0P6D6 951 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 MTA1Q13330 715 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 SLC14A2Q15849 920 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 EXOC3L4Q17RC7 722 aa6.71□□□□□ -1.33
COPS4-209ENST00000511653 CARD16Q5EG05 197 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms