RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 GLIS1Q8NBF1 620 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 BRSK1Q8TDC3 778 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 BLOC1S5Q8TDH9 187 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 SCG3Q8WXD2 468 aaKnown RBP11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 ANP32BQ92688 251 aaKnown RBP11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 GLYATL1Q969I3 302 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 VPS35Q96QK1 796 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 TBL1YQ9BQ87 522 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 SPATA16Q9BXB7 569 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 RMI1Q9H9A7 625 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 TRIM39Q9HCM9 518 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 BPIFA1Q9NP55 256 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 SPATS2LQ9NUQ6 558 aaKnown RBP11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 GOLGA6AQ9NYA3 693 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 FEZ2Q9UHY8 353 aaPredicted RBP11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 PADI4Q9UM07 663 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 GPR34Q9UPC5 381 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 ZNF148Q9UQR1 794 aa11.65□□□□□ -0.54
HMGXB3-203ENST00000510472 USP27XA6NNY8 438 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 CHUKO15111 745 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 PSMD3O43242 534 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 LDB2O43679 373 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 BUD23O43709 281 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 NUAK1O60285 661 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 OPA1O60313 960 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 SUN1O94901 812 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 AP2A1O95782 977 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 ETS1P14921 441 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 TNNT3P45378 269 aaPredicted RBP11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 GNPDA1P46926 289 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 RPIAP49247 311 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 CLDN6P56747 220 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 DAB2P98082 770 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 XIAPP98170 497 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 CTBSQ01459 385 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 SNX1Q13596 522 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 PTPRCAPQ14761 206 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 TCEA2Q15560 299 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 CHRNA6Q15825 494 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 ATP13A5Q4VNC0 1218 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 KHDC1Q4VXA5 237 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 ZNF569Q5MCW4 686 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 PERM1Q5SV97 790 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 DOK6Q6PKX4 331 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 GLT6D1Q7Z4J2 308 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 TAF8Q7Z7C8 310 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 ADGRG6Q86SQ4 1221 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 PRUNE1Q86TP1 453 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 MARCH9Q86YJ5 346 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 SLC35F6Q8N357 371 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 GALNT15Q8N3T1 639 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 PDCD7Q8N8D1 485 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 KYQ8NBH2 561 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 FAM46DQ8NEK8 389 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 MAIP1Q8WWC4 291 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 PBKQ96KB5 322 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 OR2M4Q96R27 311 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 GSDMCQ9BYG8 508 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 LRRC40Q9H9A6 602 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 ETNK1Q9HBU6 452 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 TRMT1Q9NXH9 659 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 TAAR2Q9P1P5 351 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 ATXN10Q9UBB4 475 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 MOSPD1Q9UJG1 213 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 PLEKHM1Q9Y4G2 1056 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 KCTD3Q9Y597 815 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 ARL5AQ9Y689 179 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 GOLGA4Q13439 2230 aaKnown RBP11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 ACACBO00763 2458 aa11.64□□□□□ -0.55
HMGXB3-203ENST00000510472 PRR19A6NJB7 356 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 ERI2A8K979 691 aaKnown RBP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 AGAP14A8MT82 685 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 GPR89AB7ZAQ6 455 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 UGT1A9O60656 530 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 SLC25A14O95258 325 aaPredicted RBP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 SLC4A1P02730 911 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 ZSCAN5DPP0CG00 497 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 GPR89BP0CG08 455 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 ZNF8P17098 575 aaPredicted RBP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 UGT1A6P19224 532 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 LPOP22079 712 aaPredicted RBP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 UGT1A1P22309 533 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 UGT1A4P22310 534 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 AK4P27144 223 aaPredicted RBP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 RPL22P35268 128 aaKnown RBP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 UGT1A3P35503 534 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 UGT1A5P35504 534 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 FDFT1P37268 417 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 SPAM1P38567 509 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 CLCNKAP51800 687 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 ILF3Q12906 894 aaKnown RBP eCLIP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 SEMA5AQ13591 1074 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 LRP8Q14114 963 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 HLTFQ14527 1009 aaKnown RBP eCLIP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 LONRF2Q1L5Z9 754 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 CCDC157Q569K6 752 aa11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 ZNF648Q5T619 568 aaPredicted RBP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 EFL1Q7Z2Z2 1120 aaKnown RBP11.63□□□□□ -0.55
HMGXB3-203ENST00000510472 ZNF547Q8IVP9 402 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms