RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	CNPY2	Q9Y2B0	182 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	GBF1	Q92538	1859 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	PLXNB2	O15031	1838 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	FRMPD3	Q5JV73	1810 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	FOCAD	Q5VW36	1801 aa		4.23	□□□□□ -1.73
NFKB1-208	ENST00000509165	CDK5RAP2	Q96SN8	1893 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	EME2	A4GXA9	379 aa	Predicted RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	CBY3	A6NI87	242 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PRR23D1	E9PI22	279 aa	Predicted RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PEX12	O00623	359 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PAPSS2	O95340	614 aa	Predicted RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	KRTAP5-9	P26371	169 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	HOXD10	P28358	340 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	CXCR3	P49682	368 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PPFIA1	Q13136	1202 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	MVP	Q14764	893 aa	Known RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	C20orf194	Q5TEA3	1177 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	NADSYN1	Q6IA69	706 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	APOBEC3F	Q8IUX4	373 aa	Known RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	CPO	Q8IVL8	374 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	GHDC	Q8N2G8	530 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	MIGA1	Q8NAN2	632 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	LSM14A	Q8ND56	463 aa	Known RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PRSS33	Q8NF86	280 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	OR14A16	Q8NHC5	309 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	FAM216A	Q8WUB2	273 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	HERVK_113	Q902F9	699 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	IL25	Q9H293	177 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PPCS	Q9HAB8	311 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	ENTPD7	Q9NQZ7	604 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PROCR	Q9UNN8	238 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	LRRFIP2	Q9Y608	721 aa	Known RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	FRYL	O94915	3013 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	RLF	Q13129	1914 aa		4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	COL1A1	P02452	1464 aa	Predicted RBP	4.22	□□□□□ -1.73
NFKB1-208	ENST00000509165	PDS5A	Q29RF7	1337 aa	Known RBP	4.21	□□□□□ -1.73
NFKB1-208	ENST00000509165	MYH7	P12883	1935 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	IGLV5-52	A0A0A0MRZ9	124 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	C17orf113	A0A1B0GUU1	675 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	ANKRD18B	A2A2Z9	1011 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	PRSS44	E7EML9	344 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	EBAG9	O00559	213 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	ACOT8	O14734	319 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	PER2	O15055	1255 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	ITM2A	O43736	263 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	SLC25A17	O43808	307 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	WEE2	P0C1S8	567 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	UBTFL1	P0CB47	393 aa	Predicted RBP	4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	FCGR1A	P12314	374 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	MXI1	P50539	228 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	CCR5	P51681	352 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	VGLL4	Q14135	290 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	NFATC4	Q14934	902 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	WDR45B	Q5MNZ6	344 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	PRAMEF19	Q5SWL8	479 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	PRSS45	Q7RTY3	260 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	MON1A	Q86VX9	555 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	ANKRD18A	Q8IVF6	992 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	DCP1B	Q8IZD4	617 aa	Known RBP	4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	LMO3	Q8TAP4	145 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	TBC1D22A	Q8WUA7	517 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	BAD	Q92934	168 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	YME1L1	Q96TA2	773 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	SLC25A33	Q9BSK2	321 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	PUS3	Q9BZE2	481 aa	Known RBP	4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	TM6SF1	Q9BZW5	370 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	CDT1	Q9H211	546 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	MROH8	Q9H579	483 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	COL4A6	Q14031	1691 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	BPTF	Q12830	3046 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	NOTCH4	Q99466	2003 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165		A0A0G2JMZ2	1700 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	MROH5	Q6ZUA9	1318 aa		4.21	□□□□□ -1.74
NFKB1-208	ENST00000509165	ZZEF1	O43149	2961 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165		A0A1B0GVM2	712 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	CLRN2	A0PK11	232 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	SRRM3	A6NNA2	597 aa	Predicted RBP	4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	TSPAN3	O60637	253 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	UFL1	O94874	794 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	CAPN2	P17655	700 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	RYK	P34925	604 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	SEC61A1	P61619	476 aa	Known RBP	4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	FKBP1A	P62942	108 aa	Known RBP	4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	CHRND	Q07001	517 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	ST3GAL1	Q11201	340 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	TBL3	Q12788	808 aa	Known RBP	4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	SLC12A1	Q13621	1099 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	CAPS	Q13938	189 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	KRTAP5-4	Q6L8H1	288 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	PRSS57	Q6UWY2	283 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	IL20RB	Q6UXL0	311 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	C16orf82	Q7Z2V1	217 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	DENND6A	Q8IWF6	608 aa		4.2	□□□□□ -1.74
NFKB1-208	ENST00000509165	CPXM2	Q8N436	756 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms