RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 ABCB10Q9NRK6 738 aa14.27□□□□□ -0.13
TRIM41-204ENST00000508930 TYW5A2RUC4 315 aaKnown RBP14.26□□□□□ -0.13
TRIM41-204ENST00000508930 UBXN8O00124 270 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 HS6ST1O60243 411 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 SNX2O60749 519 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 CD4P01730 458 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 PSMB9P28065 219 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 FOXA1P55317 472 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 HERVK_113P63132 956 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 PPP1R8Q12972 351 aaKnown RBP14.26□□□□□ -0.13
TRIM41-204ENST00000508930 TTLL4Q14679 1199 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 KCTD2Q14681 263 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 SPESP1Q6UW49 350 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 KIAA0408Q6ZU52 694 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 UTS2BQ765I0 119 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 NTAN1Q96AB6 310 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 PPM1MQ96MI6 270 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 ERVK-6Q9BXR3 956 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 NFKBIZQ9BYH8 718 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 SPATC1LQ9H0A9 340 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 EHD1Q9H4M9 534 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 A0A1W2PP18 115 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 CRHBPP24387 322 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 AXLP30530 894 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 IL5RAQ01344 420 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 C6orf141Q5SZD1 244 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 ZNF362Q5T0B9 420 aaPredicted RBP14.26□□□□□ -0.13
TRIM41-204ENST00000508930 DEPDC1Q5TB30 811 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 PLD3Q8IV08 490 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 GIPC2Q8TF65 315 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 NSUN5Q96P11 429 aaKnown RBP14.26□□□□□ -0.13
TRIM41-204ENST00000508930 COMMD8Q9NX08 183 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 PCDHGA11Q9Y5H2 935 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 SCN1AP35498 2009 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 G3V2T6 193 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 INMTO95050 263 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 SEC24AO95486 1093 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 FOXM1Q08050 763 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 AQP6Q13520 282 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 BLOC1S3Q6QNY0 202 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 PROSER1Q86XN7 944 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 MINDY2Q8NBR6 621 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 ASB2Q96Q27 587 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 POLG2Q9UHN1 485 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 POU2F3Q9UKI9 436 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 PCDHB3Q9Y5E6 796 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 PCDHA9Q9Y5H5 950 aa14.26□□□□□ -0.13
TRIM41-204ENST00000508930 HTR1BP28222 390 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 KCNC1P48547 511 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 CSRP3P50461 194 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 EEFSECP57772 596 aaKnown RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 OR4D2P58180 307 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 GALNT1Q10472 559 aaPredicted RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 PAGE3Q5JUK9 113 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 USP51Q70EK9 711 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 MICALL2Q8IY33 904 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 C17orf80Q9BSJ5 609 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 PDGFCQ9NRA1 345 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 COMMD10Q9Y6G5 202 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 NCF1BA6NI72 391 aaPredicted RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 NCF1CA8MVU1 366 aaPredicted RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 SLC22A3O75751 556 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 SOAT2O75908 522 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 KRT75O95678 551 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 F9P00740 461 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 ZNF286BP0CG31 522 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 NCF1P14598 390 aaPredicted RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 IST1P53990 364 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 WNT3AP56704 352 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 RBBP7Q16576 425 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 DSG4Q86SJ6 1040 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 RIOX2Q8IUF8 465 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 HDAC2Q92769 488 aaKnown RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 NCLNQ969V3 563 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 ZBED3Q96IU2 234 aaPredicted RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 FCRL5Q96RD9 977 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 INTS7Q9NVH2 962 aaKnown RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 LIMD1Q9UGP4 676 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 SHROOM3Q8TF72 1996 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 PSMD11O00231 422 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 EDNRBP24530 442 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 AIF1P55008 147 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 CLCQ05315 142 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 SV2CQ496J9 727 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 PAGE2Q7Z2X7 111 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 SCML4Q8N228 414 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 NSMCE3Q96MG7 304 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 NXF3Q9H4D5 531 aaKnown RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 SDR39U1Q9NRG7 319 aaPredicted RBP14.25□□□□□ -0.13
TRIM41-204ENST00000508930 PCDHGA8Q9Y5G5 932 aa14.25□□□□□ -0.13
TRIM41-204ENST00000508930 UBA6A0AVT1 1052 aaPredicted RBP14.24□□□□□ -0.13
TRIM41-204ENST00000508930 CCDC162PA2VCL2 907 aa14.24□□□□□ -0.13
TRIM41-204ENST00000508930 CYBBP04839 570 aa14.24□□□□□ -0.13
TRIM41-204ENST00000508930 ANXA6P08133 673 aa14.24□□□□□ -0.13
TRIM41-204ENST00000508930 CDH1P12830 882 aa14.24□□□□□ -0.13
TRIM41-204ENST00000508930 RCVRNP35243 200 aa14.24□□□□□ -0.13
TRIM41-204ENST00000508930 TRPC1P48995 793 aa14.24□□□□□ -0.13
TRIM41-204ENST00000508930 HCAR3P49019 387 aa14.24□□□□□ -0.13
TRIM41-204ENST00000508930 UFM1P61960 85 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms