RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PRAMEF6Q5VXH4 476 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MIB1Q86YT6 1006 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 LYSMD2Q8IV50 215 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 EIF1ADQ8N9N8 165 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SRFBP1Q8NEF9 429 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 OR10T2Q8NGX3 314 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TBC1D15Q8TC07 691 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SGK3Q96BR1 496 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 DDOQ99489 341 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 HEMGNQ9BXL5 484 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MUC13Q9H3R2 512 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 KCND2Q9NZV8 630 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 DNAJB4Q9UDY4 337 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ZFP69BQ9UJL9 534 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PCDHB7Q9Y5E2 793 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 C2orf92A0A1B0GVN3 265 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TARSL2A2RTX5 802 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 HS3ST1O14792 307 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SCAMP2O15127 329 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TPST2O60704 377 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PLA2G6O60733 806 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 KRT33AO76009 404 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PDE9AO76083 593 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 NTRK1P04629 796 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PFKMP08237 780 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 THRBP10828 461 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 HK1P19367 917 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FPR2P25090 351 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 DDX6P26196 483 aaKnown RBP eCLIP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CDK7P50613 346 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TRA2BP62995 288 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 DYNLL1P63167 89 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 POU6F2P78424 691 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 HTD2P86397 168 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 GUCY1B3Q02153 619 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CAPRIN1Q14444 709 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TARBP2Q15633 366 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CEBPEQ15744 281 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PFKFB3Q16875 520 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 KNOP1Q1ED39 458 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 LBX2Q6XYB7 198 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 KIAA0408Q6ZU52 694 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 EXOC3L1Q86VI1 746 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM126BQ8IUX1 230 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MAPKAPK5Q8IW41 473 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CCDC28AQ8IWP9 274 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ADGRF2Q8IZF7 708 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 AGBL3Q8NEM8 1001 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 STXBP6Q8NFX7 210 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 NEDD1Q8NHV4 660 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SYN2Q92777 582 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 KAT2AQ92830 837 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 C1orf74Q96LT6 269 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 C5orf34Q96MH7 638 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 HSPA12BQ96MM6 686 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PRICKLE1Q96MT3 831 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF518BQ9C0D4 1074 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MAGEF1Q9HAY2 307 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ETAA1Q9NY74 926 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MRPL39Q9NYK5 338 aaKnown RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 RDH8Q9NYR8 311 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 DAPK2Q9UIK4 370 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 POLR3HQ9Y535 204 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TISP43B9A030 160 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PYCARD-AS1I3L0S3 204 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ECE2O60344 883 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MMP10P09238 476 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PFKLP17858 780 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MSX1P28360 303 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 CHI3L1P36222 383 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FNTAP49354 379 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 NUP107P57740 925 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 IRX5P78411 483 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ADAM17P78536 824 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 BDH1Q02338 343 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 PDCD1Q15116 288 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FAM91A1Q658Y4 838 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SCARA3Q6AZY7 606 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 LETMD1Q6P1Q0 360 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 KANSL1Q7Z3B3 1105 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TPRA1Q86W33 373 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MICU2Q8IYU8 434 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FAM160A2Q8N612 972 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 LZTR1Q8N653 840 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 IL17RDQ8NFM7 739 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 GPR156Q8NFN8 814 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 NXPE3Q969Y0 559 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 FCRL2Q96LA5 508 aaPredicted RBP3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TCF12Q99081 682 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 NLNQ9BYT8 704 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM206Q9H813 350 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 GDAP2Q9NXN4 497 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SNX7Q9UNH6 387 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 ERVK-19Q9WJR5 959 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 SCN4AP35499 1836 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM120BA0PK00 339 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TMEM191CA6NGB0 347 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 TEX46H3BTG2 121 aa3.91□□□□□ -1.78
NEDD4-209ENST00000508871 MAGEB2O15479 319 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms