RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GTPBP1O00178 669 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CHUKO15111 745 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ANGPT2O15123 496 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CASC3O15234 703 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CLEC3AO75596 197 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TNFSF15O95150 251 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SEC24AO95486 1093 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 KRT16P08779 473 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CCR10P46092 362 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PGDP52209 483 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 HSP90AA5PQ58FG0 334 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF542PQ5EBM4 170 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TFDP3Q5H9I0 405 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ACAD10Q6JQN1 1059 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 DENND1BQ6P3S1 775 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC81Q6ZN84 652 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TMPRSS6Q8IU80 811 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 AVL9Q8NBF6 648 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LRRN4CLQ8ND94 238 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 USP7Q93009 1102 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TGM7Q96PF1 710 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PANX2Q96RD6 677 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CLSTN3Q9BQT9 956 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TTLL2Q9BWV7 592 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MINDY3Q9H8M7 445 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LRRC4CQ9HCJ2 640 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 UVRAGQ9P2Y5 699 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TELO2Q9Y4R8 837 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 COPG1Q9Y678 874 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 B2RBV5 119 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLC28A2O43868 658 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MMP20O60882 483 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SRP72O76094 671 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FTH1P02794 183 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 HRGP04196 525 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ATF4P18848 351 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MAOBP27338 520 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PTPN7P35236 360 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CCT3P49368 545 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SUCLG1P53597 346 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 AP2B1P63010 937 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 BOP1Q14137 746 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TEDDM1Q5T9Z0 273 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MARC1Q5VT66 337 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ZDHHC20Q5W0Z9 365 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 Q6ZSR6 202 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SV2AQ7L0J3 742 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FAM131BQ86XD5 332 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GPR156Q8NFN8 814 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FEZF2Q8TBJ5 459 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ELMO1Q92556 727 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 C14orf79Q96F83 325 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLC6A18Q96N87 628 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PPP1R10Q96QC0 940 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TBCBQ99426 244 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GAL3ST1Q99999 423 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLX1AQ9BQ83 275 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TUBB6Q9BUF5 446 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MLPHQ9BV36 600 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLC6A17Q9H1V8 727 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GOLPH3LQ9H4A5 285 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLAMF7Q9NQ25 335 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 RAB6BQ9NRW1 208 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 RIC8BQ9NVN3 520 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 USE1Q9NZ43 259 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 C16orf96A6NNT2 1141 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 E5RJQ4 531 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 HNRNPRO43390 633 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SNUPNO95149 360 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 UGT2B4P06133 528 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SPATA31C1P0DKV0 1188 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 PRLRP16471 622 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 KRT4P19013 534 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TGM2P21980 687 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FGFR3P22607 806 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 SLC8A1P32418 973 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GNALP38405 381 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ARG2P78540 354 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 OCA2Q04671 838 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF423Q2M1K9 1284 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 DEPDC1Q5TB30 811 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 LRRC8BQ6P9F7 803 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 DCP2Q8IU60 420 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 ZNF483Q8TF39 744 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 DLG3Q92796 817 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FGF14Q92915 247 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TMEM125Q96AQ2 219 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TUBGCP3Q96CW5 907 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 C5orf34Q96MH7 638 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FMO2Q99518 471 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CGREF1Q99674 301 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 EBNA1BP2Q99848 306 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 TBL1YQ9BQ87 522 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 CCDC28BQ9BUN5 200 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 POLR1EQ9GZS1 481 aaKnown RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 GPN2Q9H9Y4 310 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 FSCN3Q9NQT6 498 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 C20orf96Q9NUD7 363 aaPredicted RBP2.95□□□□□ -1.94
NEDD4-208ENST00000508342 MPP6Q9NZW5 540 aa2.95□□□□□ -1.94
NEDD4-208ENST00000508342 WARS2Q9UGM6 360 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms