RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 TM6SF2Q9BZW4 377 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 GALPQ9UBC7 116 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 PPIL1Q9Y3C6 166 aa17.55■□□□□ 0.4
SFXN1-208ENST00000507823 SYCE1LA8MT33 242 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 H0Y3Z8 333 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 TBX10O75333 385 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 MOSPD3O75425 235 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 IGSF6O95976 241 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 FGBP02675 491 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 RPS17P08708 135 aaKnown RBP17.54■□□□□ 0.4
SFXN1-208ENST00000507823 ATP4BP51164 291 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 PPIGQ13427 754 aaKnown RBP eCLIP17.54■□□□□ 0.42e-6■□□□□ 8.5
SFXN1-208ENST00000507823 PTK2BQ14289 1009 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 ZRANB3Q5FWF4 1079 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 DEFB107AQ8IZN7 70 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 CBARPQ8N350 705 aaPredicted RBP17.54■□□□□ 0.4
SFXN1-208ENST00000507823 TCF25Q9BQ70 676 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 CORO1BQ9BR76 489 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 GPR63Q9BZJ6 419 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 CAPN8A6NHC0 703 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 GJA1P17302 382 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 SH3BP2P78314 561 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 DGKKQ5KSL6 1271 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 C1orf146Q5VVC0 180 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 NXNQ6DKJ4 435 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 LARP4Q71RC2 724 aaKnown RBP eCLIP17.54■□□□□ 0.4
SFXN1-208ENST00000507823 OR2AP1Q8NGE2 309 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 SLC22A17Q8WUG5 538 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 ECHDC3Q96DC8 303 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 ATP13A3Q9H7F0 1226 aa17.54■□□□□ 0.4
SFXN1-208ENST00000507823 TRMT6Q9UJA5 497 aaKnown RBP17.54■□□□□ 0.4
SFXN1-208ENST00000507823 NIPSNAP2O75323 286 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 FKBP6O75344 327 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 ECI2O75521 394 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 CYBBP04839 570 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 ALPIP09923 528 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 CLCN7P51798 805 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 PTPN5P54829 565 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 SQLEQ14534 574 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 PITRM1Q5JRX3 1037 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 PPM1LQ5SGD2 360 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 C16orf89Q6UX73 402 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 ADGRG6Q86SQ4 1221 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 FBXW8Q8N3Y1 598 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 RYBPQ8N488 228 aaPredicted RBP17.53■□□□□ 0.4
SFXN1-208ENST00000507823 KYQ8NBH2 561 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 BHMTQ93088 406 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 TUBGCP5Q96RT8 1024 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 SRCP12931 536 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 CTPS1P17812 591 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 TBL3Q12788 808 aaKnown RBP17.53■□□□□ 0.4
SFXN1-208ENST00000507823 TSNQ15631 228 aaKnown RBP17.53■□□□□ 0.4
SFXN1-208ENST00000507823 PFKFB4Q16877 469 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 KANK2Q63ZY3 851 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 UGT3A1Q6NUS8 523 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 TXNDC11Q6PKC3 985 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 HMGCLL1Q8TB92 370 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.53■□□□□ 0.4
SFXN1-208ENST00000507823 RAD9AQ99638 391 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 ZFYVE1Q9HBF4 777 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 NDE1Q9NXR1 346 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 PLK2Q9NYY3 685 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 RNF112Q9ULX5 631 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 DHRS7Q9Y394 339 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 SLC30A1Q9Y6M5 507 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
SFXN1-208ENST00000507823 NOTCH4Q99466 2003 aa17.53■□□□□ 0.4
SFXN1-208ENST00000507823 ZBBXA8MT70 800 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 PRMT5O14744 637 aaPredicted RBP17.52■□□□□ 0.4
SFXN1-208ENST00000507823 CCL16O15467 120 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 SKAP2O75563 359 aaPredicted RBP17.52■□□□□ 0.4
SFXN1-208ENST00000507823 HOXA9P31269 272 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 CA8P35219 290 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 BMPR1AP36894 532 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 TPGS1Q6ZTW0 290 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 CMTM8Q8IZV2 173 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 FBXO39Q8N4B4 442 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 RIN3Q8TB24 985 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 JADE3Q92613 823 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 DOCK6Q96HP0 2047 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 AGAP14A8MT82 685 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 HIDE1A8MVS5 230 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 CDC7O00311 574 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 CLASP2O75122 1294 aaKnown RBP17.52■□□□□ 0.4
SFXN1-208ENST00000507823 SIX3O95343 332 aaPredicted RBP17.52■□□□□ 0.4
SFXN1-208ENST00000507823 TCF3P15923 654 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 HLA-FP30511 346 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 IL2P60568 153 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 SNX20Q7Z614 316 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 DSELQ8IZU8 1212 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 SIDT2Q8NBJ9 832 aaKnown RBP17.52■□□□□ 0.4
SFXN1-208ENST00000507823 ZNF483Q8TF39 744 aaPredicted RBP17.52■□□□□ 0.4
SFXN1-208ENST00000507823 CPEB1Q9BZB8 566 aaKnown RBP17.52■□□□□ 0.4
SFXN1-208ENST00000507823 CEP44Q9C0F1 390 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 UTP6Q9NYH9 597 aaKnown RBP17.52■□□□□ 0.4
SFXN1-208ENST00000507823 APPL1Q9UKG1 709 aa17.52■□□□□ 0.4
SFXN1-208ENST00000507823 A0A0U1RQS6 177 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 HNF1BP35680 557 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 VHLP40337 213 aa17.51■□□□□ 0.39
SFXN1-208ENST00000507823 LCP2Q13094 533 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms