RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PDE1CQ14123 709 aaPredicted RBP19.94■□□□□ 0.78
USP53-203ENST00000507597 NFATC4Q14934 902 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 CHRNA6Q15825 494 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 ANKRD20A4Q4UJ75 823 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 TRIM61Q5EBN2 209 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 KIAA0930Q6ICG6 404 aaPredicted RBP19.94■□□□□ 0.78
USP53-203ENST00000507597 MRNIPQ6NTE8 343 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 RFLNAQ6ZTI6 216 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 CCDC25Q86WR0 208 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 HEATR4Q86WZ0 1026 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 ZBED8Q8IZ13 594 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.94■□□□□ 0.78
USP53-203ENST00000507597 GLYATL1Q969I3 302 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 ZNF669Q96BR6 464 aaPredicted RBP19.94■□□□□ 0.78
USP53-203ENST00000507597 WDR92Q96MX6 357 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 SAYSD1Q9NPB0 183 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 TREX1Q9NSU2 369 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 TMEM74BQ9NUR3 256 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 SMOXQ9NWM0 555 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 FAM169AQ9Y6X4 670 aa19.94■□□□□ 0.78
USP53-203ENST00000507597 ATXN2Q99700 1313 aaKnown RBP19.94■□□□□ 0.78
USP53-203ENST00000507597 TNFRSF10CO14798 259 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 ASMTLO95671 621 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 GSTA2P09210 222 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 NMBRP28336 390 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 SLMAPQ14BN4 828 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 LONRF1Q17RB8 773 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 ZDHHC24Q6UX98 284 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 MACC1Q6ZN28 852 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 TAS2R42Q7RTR8 314 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 MPP5Q8N3R9 675 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 PLA2G15Q8NCC3 412 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 FBXO36Q8NEA4 188 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 OR13H1Q8NG92 308 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 OR13J1Q8NGT2 312 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 SCG3Q8WXD2 468 aaKnown RBP19.93■□□□□ 0.78
USP53-203ENST00000507597 MFSD3Q96ES6 412 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 DCUN1D1Q96GG9 259 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 RMI1Q9H9A7 625 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 ERVMER34-1Q9H9K5 563 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 TRIM39Q9HCM9 518 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 VPS9D1Q9Y2B5 631 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 ANKRD6Q9Y2G4 727 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 TEX264Q9Y6I9 313 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 CEP192Q8TEP8 1941 aa19.93■□□□□ 0.78
USP53-203ENST00000507597 CCDC78A2IDD5 438 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 H3BM21 787 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 TP73O15350 636 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 YKT6O15498 198 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 VEGFDO43915 354 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 SPAG6O75602 509 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 VAPBO95292 243 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 ZNF806P0C7X5 589 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 PMLP29590 882 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 NXPH1P58417 271 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 XIAPP98170 497 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 NHLH1Q02575 133 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 PTPRCAPQ14761 206 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 ATP13A5Q4VNC0 1218 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 ENPP7Q6UWV6 458 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 OTUD6BQ8N6M0 293 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 FUBP1Q96AE4 644 aaKnown RBP19.92■□□□□ 0.78
USP53-203ENST00000507597 CATSPERZQ9NTU4 200 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 ZDHHC18Q9NUE0 388 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 VPS18Q9P253 973 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 CHMP2BQ9UQN3 213 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 CA5BQ9Y2D0 317 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 OR1A2Q9Y585 309 aa19.92■□□□□ 0.78
USP53-203ENST00000507597 SPTY2D1-AS1A0A0U1RR47 76 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 A0A1B0GVT2 93 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 CCDC162PA2VCL2 907 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 H0Y8X5 98 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 QSOX1O00391 747 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 INPP4BO15327 924 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 CER1O95813 267 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 GOT2P00505 430 aaKnown RBP19.91■□□□□ 0.78
USP53-203ENST00000507597 MSH3P20585 1137 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 TNFRSF8P28908 595 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 PLA2G5P39877 138 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 MAGEA4P43358 317 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 ARRB1P49407 418 aaPredicted RBP19.91■□□□□ 0.78
USP53-203ENST00000507597 CARSP49589 748 aaKnown RBP19.91■□□□□ 0.78
USP53-203ENST00000507597 TTPAP49638 278 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 ILF2Q12905 390 aaKnown RBP19.91■□□□□ 0.78
USP53-203ENST00000507597 PEX6Q13608 980 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 PLA2G2CQ5R387 149 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 RNF187Q5TA31 235 aaPredicted RBP19.91■□□□□ 0.78
USP53-203ENST00000507597 PARGQ86W56 976 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 OR56A4Q8NGH8 313 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 FAM122AQ96E09 287 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 COX14Q96I36 57 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 ZNF514Q96K75 400 aaPredicted RBP19.91■□□□□ 0.78
USP53-203ENST00000507597 ZNF778Q96MU6 729 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 TCF12Q99081 682 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 AGAP2Q99490 1192 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 COPS8Q99627 209 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 FAM167BQ9BTA0 163 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 KLQ9UEF7 1012 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 SLC2A6Q9UGQ3 507 aa19.91■□□□□ 0.78
USP53-203ENST00000507597 SPAG17Q6Q759 2223 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms