RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 DUSP23Q9BVJ7 150 aa18.1■□□□□ 0.49
PDLIM7-216ENST00000506537 ARFGAP3Q9NP61 516 aa18.1■□□□□ 0.49
PDLIM7-216ENST00000506537 FEZ2Q9UHY8 353 aaPredicted RBP18.1■□□□□ 0.49
PDLIM7-216ENST00000506537 WASF3Q9UPY6 502 aa18.1■□□□□ 0.49
PDLIM7-216ENST00000506537 TPP1O14773 563 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 PSMD3O43242 534 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 SUN1O94901 812 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 ANXA6P08133 673 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 TPH1P17752 444 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 ACTN2P35609 894 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 SPAM1P38567 509 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 GRIA1P42261 906 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 ZNF140P52738 457 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 CHRNA6Q15825 494 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 ATP13A5Q4VNC0 1218 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 KHDC1Q4VXA5 237 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 C6orf132Q5T0Z8 1188 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 ZNF648Q5T619 568 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 PAPD7Q5XG87 772 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 PDPK2PQ6A1A2 396 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 ZCCHC8Q6NZY4 707 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 FAM151BQ6UXP7 276 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 MICALCLQ6ZW33 695 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 MARK2Q7KZI7 788 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 GSTA5Q7RTV2 222 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 NRROSQ86YC3 692 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 OR4K2Q8NGD2 314 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 OR52K1Q8NGK4 314 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 OR13C4Q8NGS5 318 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 BRSK1Q8TDC3 778 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 GLYATL1Q969I3 302 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 NAP1L3Q99457 506 aaPredicted RBP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 BOCQ9BWV1 1114 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 APOBEC2Q9Y235 224 aaKnown RBP18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 PKP3Q9Y446 797 aa18.09■□□□□ 0.49
PDLIM7-216ENST00000506537 PLXNB3Q9ULL4 1909 aa18.08■□□□□ 0.49
PDLIM7-216ENST00000506537 ERI2A8K979 691 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 STX7O15400 261 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 LDB2O43679 373 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 DNAJC6O75061 913 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 KRT37O76014 449 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 CKMT1AP12532 417 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 CKMT2P17540 419 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 TCP1P17987 556 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 LPOP22079 712 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 FOXC1Q12948 553 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 CCDC157Q569K6 752 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 RAB44Q7Z6P3 723 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 SLC35F3Q8IY50 421 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 DTX3LQ8TDB6 740 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 MAGOHBQ96A72 148 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 LRRC45Q96CN5 670 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 NAPGQ99747 312 aaPredicted RBP18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 VPS18Q9P253 973 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 FKBPLQ9UIM3 349 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 PLEKHM1Q9Y4G2 1056 aa18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 GOLGA4Q13439 2230 aaKnown RBP18.08■□□□□ 0.48
PDLIM7-216ENST00000506537 CEP295Q9C0D2 2601 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 AKAP13Q12802 2813 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 GLYATL1P3A0A0U1RQE8 302 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 C2orf81A6NN90 581 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 E7EVH7 732 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 PHF2O75151 1096 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 PPFIA2O75334 1257 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 MTX2O75431 263 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 SLC25A14O95258 325 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 ASMTLO95671 621 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 APRTP07741 180 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 ACP1P24666 158 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 AK4P27144 223 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 COILP38432 576 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 ADCY8P40145 1251 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 POU6F1Q14863 301 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 TRIP13Q15645 432 aaPredicted RBP18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 PYCR3Q53H96 274 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 HS1BP3Q53T59 392 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 ZDHHC20Q5W0Z9 365 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 LVRNQ6Q4G3 990 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 TAF8Q7Z7C8 310 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 ADGRG6Q86SQ4 1221 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 LINC00523Q86TU6 105 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 GKN2Q86XP6 184 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 PHYKPLQ8IUZ5 450 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 SFTPA2Q8IWL1 248 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 SDR16C5Q8N3Y7 309 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 CHCHD4Q8N4Q1 142 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 KYQ8NBH2 561 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 GPBAR1Q8TDU6 330 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 ADAMTS14Q8WXS8 1223 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 VPS35Q96QK1 796 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 OR2M4Q96R27 311 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 TRNAU1APQ9NX07 287 aaKnown RBP18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 ATXN10Q9UBB4 475 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 NEU2Q9Y3R4 380 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 PRKAB1Q9Y478 270 aa18.07■□□□□ 0.48
PDLIM7-216ENST00000506537 CCL22O00626 93 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 HYAL3O43820 417 aaPredicted RBP18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 UGT1A9O60656 530 aa18.06■□□□□ 0.48
PDLIM7-216ENST00000506537 RFPL3O75679 317 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms