RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 UCNP55089 124 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 DYNLT1P63172 113 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 VAC14Q08AM6 782 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 SRSF6Q13247 344 aaKnown RBP14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 SQSTM1Q13501 440 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 TEX44Q53QW1 395 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 ZNF648Q5T619 568 aaPredicted RBP14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 LYSMD3Q7Z3D4 306 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 TMC3Q7Z5M5 1100 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 NT5DC3Q86UY8 548 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 JAMLQ86YT9 394 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 RHOT1Q8IXI2 618 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 TC2NQ8N9U0 490 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 LSM14AQ8ND56 463 aaKnown RBP14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 USP7Q93009 1102 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 CCDC97Q96F63 343 aaPredicted RBP14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 ZNF830Q96NB3 372 aaPredicted RBP14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 GOLPH3Q9H4A6 298 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 GLOD4Q9HC38 313 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 ARFGAP3Q9NP61 516 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 SEPT10Q9P0V9 454 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 DNPEPQ9ULA0 475 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 SHOC2Q9UQ13 582 aa14.28□□□□□ -0.12
CDC42SE2-209ENST00000506419 AHCTF1Q8WYP5 2266 aa14.27□□□□□ -0.12
CDC42SE2-209ENST00000506419 IGHV1OR21-1A0A087WYE8 117 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 IGHV5-10-1A0A0J9YXX1 117 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 C9orf172C9J069 976 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 K7ENP7 123 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 MT-CYBP00156 380 aaPredicted RBP14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 PYGLP06737 847 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 JMJD7P0C870 316 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 ZFXP17010 805 aaPredicted RBP14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 MPSTP25325 297 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 CD68P34810 354 aaPredicted RBP14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 GPR3P46089 330 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 CDK18Q07002 472 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 PHF19Q5T6S3 580 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 INO80CQ6PI98 192 aaPredicted RBP14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 ZNF761Q86XN6 746 aaPredicted RBP14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 GALNT13Q8IUC8 556 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 CNGA4Q8IV77 575 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 RCBTB1Q8NDN9 531 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 GPR26Q8NDV2 337 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 CCHCR1Q8TD31 782 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 TTC9Q92623 222 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 ADGRE3Q9BY15 652 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 HAUS2Q9NVX0 235 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 DDX56Q9NY93 547 aaKnown RBP14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 FOXJ2Q9P0K8 574 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 TMEM9Q9P0T7 183 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 TBC1D29Q9UFV1 150 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 ACSL6Q9UKU0 697 aa14.27□□□□□ -0.13
CDC42SE2-209ENST00000506419 PRAMEF33A0A0G2JMD5 474 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 AURKAO14965 403 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 CST8O60676 142 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 PRAMEF10O60809 474 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 PECAM1P16284 738 aaPredicted RBP14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 ZNF8P17098 575 aaPredicted RBP14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 PTPN3P26045 913 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 LIMK2P53671 638 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 MAPK10P53779 464 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 HADHBP55084 474 aaKnown RBP14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 WASHC5Q12768 1159 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 PRKD1Q15139 912 aaPredicted RBP14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 PCSK7Q16549 785 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 KIAA1614Q5VZ46 1190 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 IYDQ6PHW0 289 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 SARM1Q6SZW1 724 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 SPOCD1Q6ZMY3 1216 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 CHST15Q7LFX5 561 aaPredicted RBP14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 ZFAND4Q86XD8 727 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 SFRP1Q8N474 314 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 SLC37A2Q8TED4 501 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 TMEM159Q96B96 161 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 TEKT5Q96M29 485 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 CMKLR1Q99788 373 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 CDH19Q9H159 772 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 ZFYVE1Q9HBF4 777 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 MAGEE1Q9HCI5 957 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 UBP1Q9NZI7 540 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 PKD2L2Q9NZM6 624 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 VPS18Q9P253 973 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 ATXN10Q9UBB4 475 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 TMPRSS11EQ9UL52 423 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 KCNK6Q9Y257 313 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 SPO11Q9Y5K1 396 aa14.26□□□□□ -0.13
CDC42SE2-209ENST00000506419 A6NCN8 305 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 ERVH48-1M5A8F1 160 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 PPP1R12AO14974 1030 aaPredicted RBP14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 SPOPO43791 374 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 NUAK1O60285 661 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 LCA5LO95447 670 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 FGF3P11487 239 aaPredicted RBP14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 CSF2RBP32927 897 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 ARSDP51689 593 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 RHDQ02161 417 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 PEX6Q13608 980 aa14.25□□□□□ -0.13
CDC42SE2-209ENST00000506419 LRP8Q14114 963 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms