RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 DPYSL3Q14195 570 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 IQCB1Q15051 598 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 PAFAH1B3Q15102 231 aaKnown RBP11.28□□□□□ -0.6
SIL1-208ENST00000505945 HADHQ16836 314 aaKnown RBP11.28□□□□□ -0.6
SIL1-208ENST00000505945 ANKRD20A8PQ5CZ79 823 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.28□□□□□ -0.6
SIL1-208ENST00000505945 DCAF12Q5T6F0 453 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 ALG1LQ6GMV1 187 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 TIGD7Q6NT04 549 aaPredicted RBP11.28□□□□□ -0.6
SIL1-208ENST00000505945 ATG14Q6ZNE5 492 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 NRSN1Q8IZ57 195 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 CACNA2D3Q8IZS8 1091 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 LPCAT1Q8NF37 534 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 OR10G6Q8NH81 332 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 TSGA13Q96PP4 275 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 WDR24Q96S15 920 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 TDRD1Q9BXT4 1180 aaKnown RBP11.28□□□□□ -0.6
SIL1-208ENST00000505945 ASPSCR1Q9BZE9 553 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 PCDH9Q9HC56 1237 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 GEMIN8Q9NWZ8 242 aaKnown RBP11.28□□□□□ -0.6
SIL1-208ENST00000505945 PDP2Q9P2J9 529 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 TBC1D29Q9UFV1 150 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 KCNK6Q9Y257 313 aa11.28□□□□□ -0.6
SIL1-208ENST00000505945 UBR5O95071 2799 aaPredicted RBP11.28□□□□□ -0.6
SIL1-208ENST00000505945 PTPN13Q12923 2485 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 FADS2P1A8MWK0 482 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
SIL1-208ENST00000505945 ARHGAP6O43182 974 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 DUX1O43812 170 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 RAD1O60671 282 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 SNX2O60749 519 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 PPFIA2O75334 1257 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 SERPING1P05155 500 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 HLA-DQB2P05538 268 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 ACP5P13686 325 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 HHEXQ03014 270 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 GBE1Q04446 702 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 SLC10A2Q12908 348 aaPredicted RBP11.27□□□□□ -0.61
SIL1-208ENST00000505945 IFI16Q16666 785 aaKnown RBP11.27□□□□□ -0.61
SIL1-208ENST00000505945 FAM182AQ5T1J6 154 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 CAVIN1Q6NZI2 390 aaKnown RBP11.27□□□□□ -0.61
SIL1-208ENST00000505945 ALKBH5Q6P6C2 394 aaKnown RBP11.27□□□□□ -0.61
SIL1-208ENST00000505945 BORAQ6PGQ7 559 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 IYDQ6PHW0 289 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 BMPERQ8N8U9 685 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 NCSTNQ92542 709 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 SYN2Q92777 582 aaPredicted RBP11.27□□□□□ -0.61
SIL1-208ENST00000505945 CTRCQ99895 268 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 SLC25A18Q9H1K4 315 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 FAM83DQ9H4H8 585 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 VPS18Q9P253 973 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 AMACRQ9UHK6 382 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 PILRAQ9UKJ1 303 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 DNPEPQ9ULA0 475 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 FLNCQ14315 2725 aa11.27□□□□□ -0.61
SIL1-208ENST00000505945 NBASA2RRP1 2371 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 C1orf232A0A0U1RR37 186 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 A0A1W2PQJ5 194 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 ANKRD66B4E2M5 251 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 JCHAINP01591 159 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 CA4P22748 312 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 PBX1P40424 430 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 MAPK9P45984 424 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 SPINT3P49223 89 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 RAB15P59190 212 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 TAS2R40P59535 323 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 RPL26P61254 145 aaKnown RBP11.26□□□□□ -0.61
SIL1-208ENST00000505945 ZBED6P86452 979 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 FANCCQ00597 558 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 MC2RQ01718 297 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 QPCTQ16769 361 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 HENMT1Q5T8I9 393 aaKnown RBP11.26□□□□□ -0.61
SIL1-208ENST00000505945 WDR74Q6RFH5 385 aaPredicted RBP11.26□□□□□ -0.61
SIL1-208ENST00000505945 ARHGAP22Q7Z5H3 698 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 PTRH1Q86Y79 214 aaKnown RBP11.26□□□□□ -0.61
SIL1-208ENST00000505945 PQLC3Q8N755 202 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 CCNYQ8ND76 341 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 ZNF564Q8TBZ8 553 aaPredicted RBP11.26□□□□□ -0.61
SIL1-208ENST00000505945 FATE1Q969F0 183 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 RTP4Q96DX8 246 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 LYSMD1Q96S90 227 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 ZNF670Q9BS34 389 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 MLPHQ9BV36 600 aaPredicted RBP11.26□□□□□ -0.61
SIL1-208ENST00000505945 SPRY4Q9C004 299 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 ARFGAP3Q9NP61 516 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 SARS2Q9NP81 518 aaKnown RBP11.26□□□□□ -0.61
SIL1-208ENST00000505945 HAUS2Q9NVX0 235 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 KLHL3Q9UH77 587 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 CAPN11Q9UMQ6 739 aa11.26□□□□□ -0.61
SIL1-208ENST00000505945 RPL26L1Q9UNX3 145 aaKnown RBP11.26□□□□□ -0.61
SIL1-208ENST00000505945 A6NCN8 305 aa11.25□□□□□ -0.61
SIL1-208ENST00000505945 KCNK1O00180 336 aa11.25□□□□□ -0.61
SIL1-208ENST00000505945 NKX2-8O15522 239 aa11.25□□□□□ -0.61
SIL1-208ENST00000505945 GRID2O43424 1007 aa11.25□□□□□ -0.61
SIL1-208ENST00000505945 PROSCO94903 275 aa11.25□□□□□ -0.61
SIL1-208ENST00000505945 MMP2P08253 660 aa11.25□□□□□ -0.61
SIL1-208ENST00000505945 F3P13726 295 aa11.25□□□□□ -0.61
SIL1-208ENST00000505945 MX2P20592 715 aa11.25□□□□□ -0.61
SIL1-208ENST00000505945 CD86P42081 329 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms