RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 ATF7IPQ6VMQ6 1270 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 DPPA4Q7L190 304 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 CACNA2D4Q7Z3S7 1137 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 NRROSQ86YC3 692 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 SLC44A1Q8WWI5 657 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 TAF15Q92804 592 aaKnown RBP eCLIP3.78□□□□□ -1.8
LINC00616-202ENST00000505874 GTF3C6Q969F1 213 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 TAAR8Q969N4 342 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 STAMBPL1Q96FJ0 436 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 PPP1R13BQ96KQ4 1090 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 FSD1Q9BTV5 496 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 TFB2MQ9H5Q4 396 aaKnown RBP3.78□□□□□ -1.8
LINC00616-202ENST00000505874 BRF2Q9HAW0 419 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 PCDHB16Q9NRJ7 776 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 INTS6Q9UL03 887 aaKnown RBP3.78□□□□□ -1.8
LINC00616-202ENST00000505874 MKLN1Q9UL63 735 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 CAMK2AQ9UQM7 478 aa3.78□□□□□ -1.8
LINC00616-202ENST00000505874 A0A1B0GU03 582 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 ZCWPW2A0A1B0GU75 182 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 CTAGE9A4FU28 777 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 HS3ST1O14792 307 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 EIF3DO15371 548 aaKnown RBP eCLIP3.77□□□□□ -1.81
LINC00616-202ENST00000505874 HOXC11O43248 304 aaPredicted RBP3.77□□□□□ -1.81
LINC00616-202ENST00000505874 SYNGR3O43761 229 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 INHBAP08476 426 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 PATE4P0C8F1 98 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 CTAGE8P0CG41 777 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 ABCD3P28288 659 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 MAPK9P45984 424 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 FASLGP48023 281 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 CCT5P48643 541 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 HSD17B4P51659 736 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 CLDN20P56880 219 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 PLIN5Q00G26 463 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 PTP4A2Q12974 167 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 GAGE5Q13069 117 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 GAGE6Q13070 117 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 SFMBT2Q5VUG0 894 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 C18orf63Q68DL7 685 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 CTAGE4Q8IX94 777 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 ADSSL1Q8N142 457 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 STPG4Q8N801 248 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 ZNF248Q8NDW4 579 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 TM9SF4Q92544 642 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 HTRA1Q92743 480 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 SAAL1Q96ER3 474 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 ASAH2Q9NR71 780 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 POLG2Q9UHN1 485 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 HAO1Q9UJM8 370 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 CYP46A1Q9Y6A2 500 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 CAPN7Q9Y6W3 813 aa3.77□□□□□ -1.81
LINC00616-202ENST00000505874 IGKV3D-15A0A087WSY6 115 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 FAM237AA0A1B0GTK4 181 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 ERI2A8K979 691 aaKnown RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 BLOC1S5-TXNDC5H3BN57 136 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 NCAM2O15394 837 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 NKX2-2O95096 273 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 F9P00740 461 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 DCTP40126 519 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 APOBEC1P41238 236 aaKnown RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 PIP4K2AP48426 406 aaPredicted RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 RUNX1T1Q06455 604 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 GRIK2Q13002 908 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 TBX2Q13207 712 aaPredicted RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 PPIGQ13427 754 aaKnown RBP eCLIP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 WDR38Q5JTN6 314 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 ZNF704Q6ZNC4 412 aaPredicted RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 OR14L1PQ8NHC6 308 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 NFKBIDQ8NI38 313 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 PSPC1Q8WXF1 523 aaKnown RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 IGSF8Q969P0 613 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 LGALS12Q96DT0 336 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 RRNAD1Q96FB5 475 aaKnown RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 SCRN2Q96FV2 425 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 HARBI1Q96MB7 349 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 NEUROD6Q96NK8 337 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 USP44Q9H0E7 712 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 LRMDAQ9H2I8 198 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 MARCH4Q9P2E8 410 aaPredicted RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 ZNF624Q9P2J8 865 aaPredicted RBP3.76□□□□□ -1.81
LINC00616-202ENST00000505874 KCNK7Q9Y2U2 307 aa3.76□□□□□ -1.81
LINC00616-202ENST00000505874 CCDC196A0A1B0GTZ2 297 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 SMIM1B2RUZ4 78 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 M0QZ24 198 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 PCDH7O60245 1069 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 PRKNO60260 465 aaPredicted RBP3.75□□□□□ -1.81
LINC00616-202ENST00000505874 CIDEAO60543 219 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 CTSVO60911 334 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 RNF224P0DH78 156 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 AHRP35869 848 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 ARL1P40616 181 aaPredicted RBP3.75□□□□□ -1.81
LINC00616-202ENST00000505874 UBA7P41226 1012 aa3.75□□□□□ -1.81
LINC00616-202ENST00000505874 ARCN1P48444 511 aaKnown RBP3.75□□□□□ -1.81
LINC00616-202ENST00000505874 HARS2P49590 506 aaKnown RBP3.75□□□□□ -1.81
LINC00616-202ENST00000505874 PPM1FP49593 454 aaPredicted RBP3.75□□□□□ -1.81
LINC00616-202ENST00000505874 DRG2P55039 364 aaKnown RBP3.75□□□□□ -1.81
LINC00616-202ENST00000505874 EIF3BP55884 814 aaKnown RBP3.75□□□□□ -1.81
LINC00616-202ENST00000505874 MAD2L1Q13257 205 aaPredicted RBP3.75□□□□□ -1.81
LINC00616-202ENST00000505874 DCTN2Q13561 401 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms