RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 GSTA5Q7RTV2 222 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 LRRC6Q86X45 466 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 ZNF354CQ86Y25 554 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 NXPE1Q8N323 547 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 GLYATL1Q969I3 302 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 HIC2Q96JB3 615 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 LGR4Q9BXB1 951 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 LRRC4CQ9HCJ2 640 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 KLF15Q9UIH9 416 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CDYLQ9Y232 598 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 SNX24Q9Y343 169 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CACNA1EQ15878 2313 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 A0A0U1RQS6 177 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 C17orf113A0A1B0GUU1 675 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 CCDC162PA2VCL2 907 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 C2orf81A6NN90 581 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 YKT6O15498 198 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 FOXD2O60548 495 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 TUBBP07437 444 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 AKT2P31751 481 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 ARL4CP56559 192 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 RPL6Q02878 288 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 UAP1Q16222 522 aaPredicted RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 ATP13A5Q4VNC0 1218 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 LDLRAP1Q5SW96 308 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 KCTD16Q68DU8 428 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 SH2D5Q6ZV89 423 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 KLHDC8AQ8IYD2 350 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 PIANPQ8IYJ0 282 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 GPR161Q8N6U8 529 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 PPHLN1Q8NEY8 458 aaKnown RBP8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 RLN3Q8WXF3 142 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 SLC6A18Q96N87 628 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 ARFGAP3Q9NP61 516 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 RABGEF1Q9UJ41 708 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 COMMD10Q9Y6G5 202 aa8.22□□□□□ -1.09
CDC42SE2-208ENST00000505065 POM121BA6NF01 834 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 S1PR4O95977 384 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 AFF3P51826 1226 aaKnown RBP8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 BASP1P80723 227 aaKnown RBP8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 ITKQ08881 620 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 CERS6Q6ZMG9 384 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 TDRPQ86YL5 185 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 OR4K2Q8NGD2 314 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 HINFPQ9BQA5 517 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 FAM83DQ9H4H8 585 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 UCK1Q9HA47 277 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 PARD6AQ9NPB6 346 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 COQ6Q9Y2Z9 468 aa8.21□□□□□ -1.09
CDC42SE2-208ENST00000505065 NUP210LQ5VU65 1888 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 GLYATL1P3A0A0U1RQE8 302 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 HMX2A2RU54 273 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 CDX4O14627 284 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 NUAK1O60285 661 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 CBFA2T3O75081 653 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 IFNB1P01574 187 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 NUDT17P0C025 328 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 ITPKAP23677 461 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 POLD2P49005 469 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 ITGA9Q13797 1035 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 PYCR3Q53H96 274 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 CTSL3PQ5NE16 218 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 CENPUQ71F23 418 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 FAM181AQ8N9Y4 354 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 HSPA12BQ96MM6 686 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 TIMM29Q9BSF4 260 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 BOCQ9BWV1 1114 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 TRIM39Q9HCM9 518 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 SUSD2Q9UGT4 822 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 A0A1B0GTQ1 180 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 GOT2P00505 430 aaKnown RBP8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 ELK3P41970 407 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 PXNP49023 591 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 TERF1P54274 439 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC7A5Q01650 507 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 SLC14A1Q13336 389 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZKSCAN8Q15776 578 aaPredicted RBP8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 CHRNA6Q15825 494 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 LONRF1Q17RB8 773 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 LRRC73Q5JTD7 316 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 PSAPL1Q6NUJ1 521 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 TRMT10CQ7L0Y3 403 aaKnown RBP8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 GLRX5Q86SX6 157 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 IFT20Q8IY31 132 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 STAMBPL1Q96FJ0 436 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 PWWP2AQ96N64 755 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 RIOK2Q9BVS4 552 aaKnown RBP8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 POPDC3Q9HBV1 291 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZDHHC3Q9NYG2 299 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 NINJ2Q9NZG7 142 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 BCCIPQ9P287 314 aaKnown RBP eCLIP8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 ASIC3Q9UHC3 531 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 FKBPLQ9UIM3 349 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF180Q9UJW8 692 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 ZNF292O60281 2723 aa8.21□□□□□ -1.1
CDC42SE2-208ENST00000505065 TLR4O00206 839 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 EIF3FO00303 357 aaPredicted RBP8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 CD38P28907 300 aa8.2□□□□□ -1.1
CDC42SE2-208ENST00000505065 ACTN2P35609 894 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms