RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 PDE1CQ14123 709 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 FZD2Q14332 565 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 PTPRCAPQ14761 206 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 MORF4L2Q15014 288 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 SKIDA1Q1XH10 827 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 AASDHQ4L235 1098 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 PCID2Q5JVF3 399 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 TPRG1LQ5T0D9 272 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 ALS2CLQ60I27 953 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 NLRP9Q7RTR0 991 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CTAGE6Q86UF2 777 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CTAGE4Q8IX94 777 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 MMGT1Q8N4V1 131 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 MINDY1Q8N5J2 469 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CEP112Q8N8E3 955 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 OR13C4Q8NGS5 318 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 SNF8Q96H20 258 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 COX14Q96I36 57 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 HIC2Q96JB3 615 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 WDR92Q96MX6 357 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 EDEM2Q9BV94 578 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 LGR4Q9BXB1 951 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 SPATA16Q9BXB7 569 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 FRMD8Q9BZ67 464 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 GAREM1Q9H706 876 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 RXFP3Q9NSD7 469 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 DNAAF2Q9NVR5 837 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 NLE1Q9NVX2 485 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 APPL1Q9UKG1 709 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CNOT6Q9ULM6 557 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 CEP250Q9BV73 2442 aa11.83□□□□□ -0.52
PDLIM5-208ENST00000504489 GLYATL1P3A0A0U1RQE8 302 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 A0A1B0GTQ1 180 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 GAPDHSO14556 408 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 TNFRSF10CO14798 259 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 YKT6O15498 198 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 SEC31AO94979 1220 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 MGAT1P26572 445 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 RPL21P46778 160 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 DRG2P55039 364 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 XIAPP98170 497 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 ACVR1Q04771 509 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 EIF2B5Q13144 721 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 ITGA9Q13797 1035 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 SEPT6Q14141 434 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 CHRNA6Q15825 494 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 ATP13A5Q4VNC0 1218 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 CCDC38Q502W7 563 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 TSTD2Q5T7W7 516 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 DUPD1Q68J44 220 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 HIBCHQ6NVY1 386 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 PARGQ86W56 976 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 BBOF1Q8ND07 529 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 PPHLN1Q8NEY8 458 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 BTN2A2Q8WVV5 523 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 GLYATL1Q969I3 302 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 CDKN2AIPNLQ96HQ2 116 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 DNAJC1Q96KC8 554 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 SERPINB12Q96P63 405 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 VPS35Q96QK1 796 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 ELF4Q99607 663 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 GTPBP2Q9BX10 602 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 TRIM31Q9BZY9 425 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 RAB17Q9H0T7 212 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 MRM3Q9HC36 420 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 TMEM9BQ9NQ34 198 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 WHRNQ9P202 907 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 FKBPLQ9UIM3 349 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 UTP11Q9Y3A2 253 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 TCAF1Q9Y4C2 921 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 RP1P56715 2156 aa11.82□□□□□ -0.52
PDLIM5-208ENST00000504489 CNOT1A5YKK6 2376 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 ASXL3Q9C0F0 2248 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 MAGEB16A2A368 324 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 TMEM202A6NGA9 273 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 SDR42E2A6NKP2 422 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 AGAP14A8MT82 685 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 GOLGA8MH3BSY2 632 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 TP73O15350 636 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 AVILO75366 819 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 SRP72O76094 671 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 CSF2P04141 144 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 NME1P15531 152 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 ARRB1P49407 418 aaPredicted RBP11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 LIMK1P53667 647 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 ITGA8P53708 1063 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 MRPS25P82663 173 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 TMPRSS15P98073 1019 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 PEX6Q13608 980 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 SHBQ15464 509 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 C8orf74Q6P047 294 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 ENPP7Q6UWV6 458 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 FAM151BQ6UXP7 276 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 ALYREFQ86V81 257 aaKnown RBP11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 KIAA2013Q8IYS2 634 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 OR56A4Q8NGH8 313 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 OR2I1PQ8NGU4 316 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 ZNF398Q8TD17 642 aa11.81□□□□□ -0.52
PDLIM5-208ENST00000504489 LRRC1Q9BTT6 524 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms