RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PANX3Q96QZ0 392 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PANX1Q96RD7 426 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 AGPAT5Q9NUQ2 364 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PAG1Q9NWQ8 432 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ANGEL1Q9UNK9 670 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 CNTNAP5Q8WYK1 1306 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 OR14I1A6ND48 311 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 C11orf95C9JLR9 678 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TOX4O94842 621 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 NKX2-2O95096 273 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 EBLN1P0CF75 366 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 KHKP50053 298 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 EIF3BP55884 814 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TAS2R40P59535 323 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 OTUD4Q01804 1114 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 AIMP2Q13155 320 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TP53BP2Q13625 1128 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 SLC27A1Q6PCB7 646 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PPP1R32Q7Z5V6 425 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 MTERF4Q7Z6M4 381 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 CABP7Q86V35 215 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TPRA1Q86W33 373 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TDRPQ86YL5 185 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ABHD5Q8WTS1 349 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PTPMT1Q8WUK0 201 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 HEXDCQ8WVB3 486 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TMEM186Q96B77 213 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 EEF2KMTQ96G04 330 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 COX4I2Q96KJ9 171 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 BTBD2Q9BX70 525 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 FAM192AQ9GZU8 254 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 BARX1Q9HBU1 254 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 XPNPEP3Q9NQH7 507 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 C20orf141Q9NUB4 165 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PRMT7Q9NVM4 692 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 HESX1Q9UBX0 185 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 FBXW11Q9UKB1 542 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PLEKHA6Q9Y2H5 1048 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 SNX14Q9Y5W7 946 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 A0A1B0GVM2 712 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 FITM1A5D6W6 292 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ANKDD1BA6NHY2 528 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 LRRC53A6NM62 1247 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 HSBP1L1C9JCN9 74 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 CYR61O00622 381 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 SAP30O75446 220 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 CHRM2P08172 466 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 C1SP09871 688 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 MYF6P23409 242 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 SLC5A2P31639 672 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ATP5C1P36542 298 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ME1P48163 572 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 CSTF3Q12996 717 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 BAATQ14032 418 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 FAM214AQ32MH5 1076 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 HIKESHIQ53FT3 197 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 CFAP157Q5JU67 520 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 KCTD11Q693B1 232 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 DENND1BQ6P3S1 775 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TTC23LQ6PF05 361 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 CFAP77Q6ZQR2 320 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ZDHHC21Q8IVQ6 265 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 SPNS2Q8IVW8 549 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 BATF2Q8N1L9 274 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 IGDCC4Q8TDY8 1250 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 GTF3C6Q969F1 213 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 WBP2Q969T9 261 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 LRRC39Q96DD0 335 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 C19orf60Q96EN9 201 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ZNF416Q9BWM5 594 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 COL25A1Q9BXS0 654 aaPredicted RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 RAB17Q9H0T7 212 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 ACTR8Q9H981 624 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 RRAGCQ9HB90 399 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 PRDM7Q9NQW5 492 aa5.22□□□□□ -1.57
NIPBL-204ENST00000504430 DRG1Q9Y295 367 aaKnown RBP5.22□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3DA0A087WVF3 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3IA0A087WXS9 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3EA0A087X179 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3KA0A087X1G2 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 A0A1W2PQ45 241 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 A0A1W2PQY0 241 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3BA6NDS4 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3FA6NER0 549 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3LB9A6J9 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 SCAMP2O15127 329 aaKnown RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TLX2O43763 284 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 MED24O75448 989 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 SIX3O95343 332 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 RHOP08100 348 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 TBC1D3HP0C7X1 549 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 HOXB4P17483 251 aaPredicted RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 VCLP18206 1134 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 ATP5JP18859 108 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 ANXA13P27216 316 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 MC3RP41968 323 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 SERPINH1P50454 418 aaKnown RBP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 HNRNPKP61978 463 aaKnown RBP eCLIP5.21□□□□□ -1.57
NIPBL-204ENST00000504430 WDR72Q3MJ13 1102 aa5.21□□□□□ -1.57
NIPBL-204ENST00000504430 ZSCAN23Q3MJ62 389 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms