RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 NR1D2Q14995 579 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 RFTN2Q52LD8 501 aaPredicted RBP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 DEF8Q6ZN54 512 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 CCDC185Q8N715 623 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 RBM15BQ8NDT2 890 aaKnown RBP16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 TTLL2Q9BWV7 592 aa16.47■□□□□ 0.23
PCDHA1-203ENST00000504120 AHCYL1O43865 530 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 MGRN1O60291 552 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 UGT2B11O75310 529 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 FGBP02675 491 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 SLC26A3P40879 764 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 PTGIRP43119 386 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 ASMTP46597 345 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 MAPKAPK2P49137 400 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 TRAP1Q12931 704 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 GPR158Q5T848 1215 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 CRTC3Q6UUV7 619 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 DSELQ8IZU8 1212 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 KLHL23Q8NBE8 558 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 LMAN2LQ9H0V9 348 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 KLHL31Q9H511 634 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 SEMA3GQ9NS98 782 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 CHD2O14647 1828 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 STK16O75716 305 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 CDH4P55283 916 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 FASTKD3Q14CZ7 662 aaKnown RBP16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 GPR107Q5VW38 600 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 ANKRD22Q5VYY1 191 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 PGAM4Q8N0Y7 254 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 PHC3Q8NDX5 983 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 OR2T34Q8NGX1 318 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 OR2T3Q8NH03 318 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 AP3S1Q92572 193 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 CDH22Q9UJ99 828 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 STON1Q9Y6Q2 735 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 SYN3O14994 580 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 ECDO95905 644 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 CHRNB2P17787 502 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 SP100P23497 879 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 PBX3P40426 434 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 KIR3DL1P43629 444 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 NDST2P52849 883 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 NDUFA5Q16718 116 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 KCTD19Q17RG1 926 aaPredicted RBP16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 SCAIQ8N9R8 606 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 MTMR14Q8NCE2 650 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 AIF1LQ9BQI0 150 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 MAGEH1Q9H213 219 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 HIPK3Q9H422 1215 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 CMTM6Q9NX76 183 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 OGDHLQ9ULD0 1010 aa16.46■□□□□ 0.23
PCDHA1-203ENST00000504120 RPTORQ8N122 1335 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 IRGMA1A4Y4 181 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 GSAPA4D1B5 854 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 BTBD19C9JJ37 291 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 ABLIM1O14639 778 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 CD48P09326 243 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 LSM3P62310 102 aaKnown RBP16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 TSSK3Q96PN8 268 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 GPR21Q99679 349 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 RSPH9Q9H1X1 276 aaPredicted RBP16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 ABCG8Q9H221 673 aa16.46■□□□□ 0.22
PCDHA1-203ENST00000504120 DUSP11O75319 330 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 NR2F6P10588 404 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 CCR3P51677 355 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 LGALS3BPQ08380 585 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 MTX3Q5HYI7 312 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 PPM1JQ5JR12 505 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 GLYATQ6IB77 296 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 TFAP2BQ92481 460 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 NOL11Q9H8H0 719 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 EIF2B3Q9NR50 452 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 EXD2Q9NVH0 621 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 DMTF1Q9Y222 760 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 LIN7AO14910 233 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 TIPRLO75663 272 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 CAPN1P07384 714 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 PCSK2P16519 638 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 ITPKAP23677 461 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 ADSLP30566 484 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 SSR2P43308 183 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 CLCNKBP51801 687 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 DSC2Q02487 901 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 APOLD1Q96LR9 279 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 SLC9A7Q96T83 725 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 NTPCRQ9BSD7 190 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 SSR3Q9UNL2 185 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 MRPS33Q9Y291 106 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 USP2O75604 605 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 DNTTP04053 509 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 GNA12Q03113 381 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 ELP6Q0PNE2 266 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 ARL13AQ5H913 290 aaPredicted RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 PTCHD4Q6ZW05 846 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 HPS6Q86YV9 775 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 RTL3Q8N8U3 475 aaKnown RBP16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 FAM47BQ8NA70 645 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 AASDHPPTQ9NRN7 309 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
PCDHA1-203ENST00000504120 H3BM21 787 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms