RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ANKRD23Q86SG2 305 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 RNF168Q8IYW5 571 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 TAGAPQ8N103 731 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 HJURPQ8NCD3 748 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR14A16Q8NHC5 309 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 ELP5Q8TE02 316 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 RND1Q92730 232 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 PGAM5Q96HS1 289 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 LMLNQ96KR4 655 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 NAP1L5Q96NT1 182 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR2A14Q96R47 310 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 KXD1Q9BQD3 176 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 SRSF8Q9BRL6 282 aaKnown RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 HAUS8Q9BT25 410 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 MMTAG2Q9BU76 263 aaKnown RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 PLK3Q9H4B4 646 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 CNGB3Q9NQW8 809 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 SETD4Q9NVD3 440 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 SLC9A2Q9UBY0 812 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 TTC7AQ9ULT0 858 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 MYO6Q9UM54 1294 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 NENFQ9UMX5 172 aa2.45□□□□□ -2.02
HMGB1P35-201ENST00000503360 RPGRIP1LQ68CZ1 1315 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 hDV102S1A0JD36 115 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 BICDL2A1A5D9 508 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 B4DLN1 442 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ATP2A1O14983 1001 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 NDUFS7O75251 213 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SERPINI2O75830 405 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 TPPPO94811 219 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 UMODP07911 640 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 HSP90AB1P08238 724 aaKnown RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SRPRAP08240 638 aaKnown RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 HOXC6P09630 235 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 DDX5P17844 614 aaKnown RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 PRCPP42785 496 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 MRPL12P52815 198 aaKnown RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 RAD23BP54727 409 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ZBED6P86452 979 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 DSC1Q08554 894 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACSM2AQ08AH3 577 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 Q0VFX4 171 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 EPS8Q12929 822 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 GRIK2Q13002 908 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 PNLIPRP3Q17RR3 467 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SOWAHCQ53LP3 525 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 PPP6R3Q5H9R7 873 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 RAB41Q5JT25 222 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SPECC1Q5M775 1068 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 CFAP58Q5T655 872 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACSM2BQ68CK6 577 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 PMS2CLQ68D20 193 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SLC36A4Q6YBV0 504 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 CFAP77Q6ZQR2 320 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 FAM43BQ6ZT52 329 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ENOSF1Q7L5Y1 443 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 CACNA2D4Q7Z3S7 1137 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 FJX1Q86VR8 437 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 NR2C2APQ86WQ0 139 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 OR8K5Q8NH50 307 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 JAKMIP2Q96AA8 810 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 PHF21BQ96EK2 531 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SAT2Q96F10 170 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SEPT5Q99719 369 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SH3GL2Q99962 352 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SLC25A33Q9BSK2 321 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 CENPOQ9BU64 300 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 MXD3Q9BW11 206 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ALDH8A1Q9H2A2 487 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ZNF556Q9HAH1 456 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 MMP25Q9NPA2 562 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ACSS1Q9NUB1 689 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 OGFRQ9NZT2 677 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 CWC15Q9P013 229 aaKnown RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SUCLA2Q9P2R7 463 aaPredicted RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 TINAGQ9UJW2 476 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 RPS6KA6Q9UK32 745 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 AGO1Q9UL18 857 aaKnown RBP2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 TMEM5Q9Y2B1 443 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 SNX9Q9Y5X1 595 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 CLIC4Q9Y696 253 aa2.44□□□□□ -2.02
HMGB1P35-201ENST00000503360 ATXN2Q99700 1313 aaKnown RBP2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 A0A1B0GUV1 79 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 A0A1B0GVY2 172 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CPED1A4D0V7 1026 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 LINC01553A4QN01 128 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CDRT15L2A8MXV6 281 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 M0QZ24 198 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 SOCS6O14544 535 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CTDSP2O14595 271 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 GRID2O43424 1007 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 KCNJ13O60928 360 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 LDB3O75112 727 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 GPC4O75487 556 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 DAB1O75553 588 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 BEST1O76090 585 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 ZNF432O94892 652 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 CAMTA2O94983 1202 aa2.43□□□□□ -2.02
HMGB1P35-201ENST00000503360 STARD3NLO95772 234 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms