RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CCL4P13236 92 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 PECAM1P16284 738 aaPredicted RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 CA4P22748 312 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 MPSTP25325 297 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 CSF2RBP32927 897 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 MLLT3P42568 568 aaPredicted RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 VAC14Q08AM6 782 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 EIF3IQ13347 325 aaKnown RBP16.13■□□□□ 0.17
SCLT1-204ENST00000503215 NR1D2Q14995 579 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 PDK1Q15118 436 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 TCEAL1Q15170 157 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 PCSK7Q16549 785 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 MAP9Q49MG5 647 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 ALS2CLQ60I27 953 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 PIM3Q86V86 326 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 GALNT13Q8IUC8 556 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 TC2NQ8N9U0 490 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 USP7Q93009 1102 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 CDH19Q9H159 772 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 FOXJ2Q9P0K8 574 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 TMEM9Q9P0T7 183 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 PCDHGA7Q9Y5G6 932 aa16.13■□□□□ 0.17
SCLT1-204ENST00000503215 PRAMEF33A0A0G2JMD5 474 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 IGHV5-10-1A0A0J9YXX1 117 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 PRAMEF10O60809 474 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 SLC4A1P02730 911 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 CDKN2BP42772 138 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 MARCKSL1P49006 195 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 MAPK10P53779 464 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 UCNP55089 124 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 TAZQ16635 292 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 KIAA1614Q5VZ46 1190 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 NT5DC3Q86UY8 548 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 ZFAND4Q86XD8 727 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 VSIG1Q86XK7 387 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 RHOT1Q8IXI2 618 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 GPR26Q8NDV2 337 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 SLC37A2Q8TED4 501 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 PMEPA1Q969W9 287 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 ADGRE3Q9BY15 652 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 SLC25A51Q9H1U9 297 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 HAUS2Q9NVX0 235 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 UBP1Q9NZI7 540 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 TBC1D29Q9UFV1 150 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 DNPEPQ9ULA0 475 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 INTUQ9ULD6 942 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 KCNK6Q9Y257 313 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 SPO11Q9Y5K1 396 aa16.12■□□□□ 0.17
SCLT1-204ENST00000503215 IGHV1OR21-1A0A087WYE8 117 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 C9orf172C9J069 976 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 F5H423 210 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-204ENST00000503215 AURKAO14965 403 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 SPOPO43791 374 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 PMPCBO75439 489 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 PTPN3P26045 913 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 CD68P34810 354 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-204ENST00000503215 SLC1A1P43005 524 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 MAGEA1P43355 309 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 BIRC2Q13490 618 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 PRKD1Q15139 912 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-204ENST00000503215 NOMO1Q15155 1222 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 KAZNQ674X7 775 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 CHST15Q7LFX5 561 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-204ENST00000503215 CNGA4Q8IV77 575 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 SNRNP27Q8WVK2 155 aaKnown RBP16.11■□□□□ 0.17
SCLT1-204ENST00000503215 CCDC97Q96F63 343 aaPredicted RBP16.11■□□□□ 0.17
SCLT1-204ENST00000503215 CCDC74BQ96LY2 380 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 SEMA4CQ9C0C4 833 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 ZFYVE1Q9HBF4 777 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 GLOD4Q9HC38 313 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 PKD2L2Q9NZM6 624 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 ATXN10Q9UBB4 475 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 ALG6Q9Y672 507 aa16.11■□□□□ 0.17
SCLT1-204ENST00000503215 K7ENP7 123 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 PPP1R12AO14974 1030 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-204ENST00000503215 NVLO15381 856 aaKnown RBP16.1■□□□□ 0.17
SCLT1-204ENST00000503215 CST8O60676 142 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 PYGLP06737 847 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 ACP5P13686 325 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 ZFXP17010 805 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-204ENST00000503215 ZNF8P17098 575 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-204ENST00000503215 GPR3P46089 330 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 ARSDP51689 593 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 CDK18Q07002 472 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 WASHC5Q12768 1159 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 TEX44Q53QW1 395 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 INO80CQ6PI98 192 aaPredicted RBP16.1■□□□□ 0.17
SCLT1-204ENST00000503215 SPOCD1Q6ZMY3 1216 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 TMC3Q7Z5M5 1100 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 SFRP1Q8N474 314 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 CCHCR1Q8TD31 782 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 TTC9Q92623 222 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 CMKLR1Q99788 373 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 DDX56Q9NY93 547 aaKnown RBP16.1■□□□□ 0.17
SCLT1-204ENST00000503215 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.1■□□□□ 0.17
SCLT1-204ENST00000503215 VPS18Q9P253 973 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 TMPRSS11EQ9UL52 423 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 ZNF711Q9Y462 761 aa16.1■□□□□ 0.17
SCLT1-204ENST00000503215 CFAP46Q8IYW2 2715 aa16.09■□□□□ 0.17
SCLT1-204ENST00000503215 A6NCN8 305 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms