RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 TCEAL8Q8IYN2 117 aa7.38□□□□□ -1.23
PDGFC-203ENST00000502773 KIAA1958Q8N8K9 716 aa7.38□□□□□ -1.23
PDGFC-203ENST00000502773 LPCAT1Q8NF37 534 aa7.38□□□□□ -1.23
PDGFC-203ENST00000502773 ZFRQ96KR1 1074 aaKnown RBP7.38□□□□□ -1.23
PDGFC-203ENST00000502773 PRM3Q9NNZ6 103 aa7.38□□□□□ -1.23
PDGFC-203ENST00000502773 KCTD5Q9NXV2 234 aa7.38□□□□□ -1.23
PDGFC-203ENST00000502773 TDRKHQ9Y2W6 561 aaKnown RBP7.38□□□□□ -1.23
PDGFC-203ENST00000502773 PCDHGA3Q9Y5H0 932 aa7.38□□□□□ -1.23
PDGFC-203ENST00000502773 RAI2Q9Y5P3 530 aa7.38□□□□□ -1.23
PDGFC-203ENST00000502773 ZFP37Q9Y6Q3 630 aaPredicted RBP7.38□□□□□ -1.23
PDGFC-203ENST00000502773 MRASO14807 208 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 NRP2O60462 931 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 CXCL10P02778 98 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 SUOXP51687 545 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 MYBPC3Q14896 1274 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 AGKQ53H12 422 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ACSBG2Q5FVE4 666 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 CACHD1Q5VU97 1274 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 CD300LGQ6UXG3 332 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 KDELC2Q7Z4H8 507 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 DSELQ8IZU8 1212 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 CBARPQ8N350 705 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 CPXM2Q8N436 756 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ANKLE1Q8NAG6 615 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PDLIM5Q96HC4 596 aaKnown RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 UBXN10Q96LJ8 280 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 TMEM209Q96SK2 561 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 C12orf65Q9H3J6 166 aaKnown RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 MID1IP1Q9NPA3 183 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 NMRK1Q9NWW6 199 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 SLC7A8Q9UHI5 535 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 CRLS1Q9UJA2 301 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 LEF1Q9UJU2 399 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 SLC27A5Q9Y2P5 690 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 N6AMT1Q9Y5N5 214 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 SNX10Q9Y5X0 201 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 A8MT66 165 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 H7C0S8 307 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 WDR47O94967 919 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 KRT6AP02538 564 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 KRT6BP04259 564 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 OR56A5P0C7T3 313 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 HDCP19113 662 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 RPS3P23396 243 aaKnown RBP eCLIP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 KRT6CP48668 564 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PLK1P53350 603 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PSME3P61289 254 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 C16orf72Q14CZ0 275 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 TRIP10Q15642 601 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 KCTD19Q17RG1 926 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 SPRED3Q2MJR0 410 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 NUDT18Q6ZVK8 323 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PATL1Q86TB9 770 aaKnown RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 GATAD2AQ86YP4 633 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PTGR2Q8N8N7 351 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 TRPC4APQ8TEL6 797 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 TADA1Q96BN2 335 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 TUBGCP3Q96CW5 907 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 OTUB2Q96DC9 234 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ERLEC1Q96DZ1 483 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 C19orf60Q96EN9 201 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 TBATAQ96M53 351 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 LENG8Q96PV6 779 aaPredicted RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 CDRT15Q96T59 188 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ECSITQ9BQ95 431 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 C1QTNF1Q9BXJ1 281 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ALG9Q9H6U8 611 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ANKRD33BA6NCL7 494 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ATP6V1B1P15313 513 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 MPSTP25325 297 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PSMA4P25789 261 aaKnown RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ESRRGP62508 458 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 SMAD3P84022 425 aaKnown RBP7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ARHGEF7Q14155 803 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 UTS2BQ765I0 119 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PROSER1Q86XN7 944 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 DENND6AQ8IWF6 608 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 FAM126BQ8IXS8 530 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PACRGLQ8N7B6 248 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 ARRDC2Q8TBH0 407 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 LRRN4Q8WUT4 740 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 THAP11Q96EK4 314 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PIDD1Q9HB75 910 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PLAC1Q9HBJ0 212 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 TMEM39AQ9NV64 488 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 PKD2L2Q9NZM6 624 aa7.37□□□□□ -1.23
PDGFC-203ENST00000502773 AQP12BA6NM10 295 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 ANKRD66B4E2M5 251 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 J3KR12 359 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 TK2O00142 265 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 RGS14O43566 566 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 XYLBO75191 536 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 SERPINI2O75830 405 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 ENO2P09104 434 aaPredicted RBP7.36□□□□□ -1.23
PDGFC-203ENST00000502773 C7P10643 843 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 RXRGP48443 463 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 SLC25A3Q00325 362 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 EPS8Q12929 822 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 ATP1A4Q13733 1029 aa7.36□□□□□ -1.23
PDGFC-203ENST00000502773 PTPRNQ16849 979 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms