RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 EFTUD2Q15029 972 aaKnown RBP eCLIP4.52□□□□□ -1.692e-6■■■□□ 14.6
MATR3-202ENST00000502422 INAQ16352 499 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CYP1B1Q16678 543 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 GRAMD1BQ3KR37 738 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 PCSK4Q6UW60 755 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 LAYNQ6UX15 382 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 SERPINA13PQ6UXR4 307 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 DCDC5Q6ZRR9 648 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 HTR3DQ70Z44 454 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 KRT77Q7Z794 578 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 DHDDSQ86SQ9 333 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TRABD2AQ86V40 505 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CCDC25Q86WR0 208 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 BRSK2Q8IWQ3 736 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 SYCE1Q8N0S2 351 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 GUF1Q8N442 669 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 MARVELD2Q8N4S9 558 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 PYROXD1Q8WU10 500 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ZNF75CPQ92670 426 aaPredicted RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 MCUR1Q96AQ8 359 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 NACC2Q96BF6 587 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TRIM11Q96F44 468 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CLPTM1LQ96KA5 538 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CYTH2Q99418 400 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TTC1Q99614 292 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 MED10Q9BTT4 135 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TUBB6Q9BUF5 446 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CIPCQ9C0C6 399 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 MTMR12Q9C0I1 747 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 C6orf106Q9H6K1 298 aaPredicted RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 ARMC7Q9H6L4 198 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ZNF696Q9H7X3 374 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CPNE5Q9HCH3 593 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TM9SF3Q9HD45 589 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 FBXO6Q9NRD1 293 aaPredicted RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 HEY2Q9UBP5 337 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TBK1Q9UHD2 729 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 SLC7A8Q9UHI5 535 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 AJAP1Q9UKB5 411 aaPredicted RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 AMFRQ9UKV5 643 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 TSC22D4Q9Y3Q8 395 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 N6AMT1Q9Y5N5 214 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 STYXL1Q9Y6J8 313 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 A0A1B0GTQ1 180 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TMEM238LA0A1B0GVL6 79 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 GOLGA8IPA6NC78 632 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 GOLGA8JA6NMD2 632 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CBX4O00257 560 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 EIF1AYO14602 144 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 NDC80O14777 642 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 KLK10O43240 276 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 DENRO43583 198 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 TYROBPO43914 113 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CDH16O75309 829 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TM7SF2O76062 418 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 SEMA4FO95754 770 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 BAG2O95816 211 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 IGHA1P01876 353 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 DNTTP04053 509 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 RPLP1P05386 114 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 PTPN1P18031 435 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 CD27P26842 260 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 PEX2P28328 305 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ADSSP30520 456 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ATP5C1P36542 298 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 ARRB1P49407 418 aaPredicted RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 BCAT1P54687 386 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 GALCP54803 685 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 RPS3AP61247 264 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 AP2B1P63010 937 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 MYBPC1Q00872 1141 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 LRRC63Q05C16 580 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 SPARCL1Q14515 664 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TRMT5Q32P41 509 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 PRAMEF14Q5SWL7 426 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CNNM4Q6P4Q7 775 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 FOXR2Q6PJQ5 311 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ISLR2Q6UXK2 745 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ZNF438Q7Z4V0 828 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TTC7BQ86TV6 843 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ERI1Q8IV48 349 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 TRIM59Q8IWR1 403 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ULK2Q8IYT8 1036 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 EID2Q8N6I1 236 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 SLC30A5Q8TAD4 765 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 KBTBD7Q8WVZ9 684 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 CCDC127Q96BQ5 260 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 BIRC7Q96CA5 298 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 MED8Q96G25 268 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ABHD17AQ96GS6 310 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 NSMCE3Q96MG7 304 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 PWWP2AQ96N64 755 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 BIRC8Q96P09 236 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 KCNK16Q96T55 309 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ELF4Q99607 663 aaPredicted RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 GSX2Q9BZM3 304 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 SEMA4CQ9C0C4 833 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ZNF518BQ9C0D4 1074 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 KLHL4Q9C0H6 718 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms