RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SLC17A4Q9Y2C5 497 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 OAS3Q9Y6K5 1087 aaKnown RBP16.64■□□□□ 0.25
PRKCB-210ENST00000498739 CSNK1G3Q9Y6M4 447 aa16.64■□□□□ 0.25
PRKCB-210ENST00000498739 SPAARA0A1B0GVQ0 90 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 TRIM38O00635 465 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 LDB2O43679 373 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 SLC25A14O95258 325 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-210ENST00000498739 LDOC1O95751 146 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-210ENST00000498739 CELA2BP08218 269 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-210ENST00000498739 GIMD1P0DJR0 217 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 SIM1P81133 766 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-210ENST00000498739 ELOCQ15369 112 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 PPP1R7Q15435 360 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 CHRNA6Q15825 494 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 DEFB133Q30KQ1 61 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 ATP13A5Q4VNC0 1218 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 CERCAMQ5T4B2 595 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 PHYKPLQ8IUZ5 450 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 KLHL7Q8IXQ5 586 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 FSTL5Q8N475 847 aaPredicted RBP16.63■□□□□ 0.25
PRKCB-210ENST00000498739 OR4C6Q8NH72 309 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 GLYATL1Q969I3 302 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 CNDP2Q96KP4 475 aaKnown RBP16.63■□□□□ 0.25
PRKCB-210ENST00000498739 ARFGAP3Q9NP61 516 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 CASS4Q9NQ75 786 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 NLGN3Q9NZ94 848 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 FKBPLQ9UIM3 349 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 DOLKQ9UPQ8 538 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 SCN8AQ9UQD0 1980 aa16.63■□□□□ 0.25
PRKCB-210ENST00000498739 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.62■□□□□ 0.25
PRKCB-210ENST00000498739 GPR39O43194 453 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 SIGLEC6O43699 453 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 FUCA1P04066 466 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 IVLP07476 585 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 ANXA6P08133 673 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 TPSB2P20231 275 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 HADHAP40939 763 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 ZNF140P52738 457 aaPredicted RBP16.62■□□□□ 0.25
PRKCB-210ENST00000498739 ITGA9Q13797 1035 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 TPSAB1Q15661 275 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 CCDC38Q502W7 563 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 ZNF648Q5T619 568 aaPredicted RBP16.62■□□□□ 0.25
PRKCB-210ENST00000498739 GKN2Q86XP6 184 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 GDAP1Q8TB36 358 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 DTX3LQ8TDB6 740 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 DNAJC1Q96KC8 554 aaKnown RBP16.62■□□□□ 0.25
PRKCB-210ENST00000498739 VPS35Q96QK1 796 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 DUSP23Q9BVJ7 150 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 TMEM168Q9H0V1 697 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 VPS18Q9P253 973 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 APPL1Q9UKG1 709 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 NEU2Q9Y3R4 380 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 GPSM3Q9Y4H4 160 aa16.62■□□□□ 0.25
PRKCB-210ENST00000498739 LRP4O75096 1905 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 TCRBV7S3A2A0A539 114 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 CCDC78A2IDD5 438 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 LMO7DNF2Z398 122 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 CCDC188H7C350 402 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 CCL22O00626 93 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 GAPDHSO14556 408 aaPredicted RBP16.61■□□□□ 0.25
PRKCB-210ENST00000498739 YY2O15391 372 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 TNFSF14O43557 240 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A9O60656 530 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 MTX2O75431 263 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 PRAMEF1O95521 474 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A6P19224 532 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A1P22309 533 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A4P22310 534 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A3P35503 534 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A5P35504 534 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 KCNJ11Q14654 390 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 TAF8Q7Z7C8 310 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 GALNT13Q8IUC8 556 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 CCL4L1Q8NHW4 92 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 OR2M4Q96R27 311 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A7Q9HAW7 530 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A10Q9HAW8 530 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 UGT1A8Q9HAW9 530 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 NLE1Q9NVX2 485 aaPredicted RBP16.61■□□□□ 0.25
PRKCB-210ENST00000498739 ATXN10Q9UBB4 475 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 PCYOX1Q9UHG3 505 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 TMPRSS11EQ9UL52 423 aa16.61■□□□□ 0.25
PRKCB-210ENST00000498739 HEATR9A2RTY3 570 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 TPP1O14773 563 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 DNAJC6O75061 913 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 SRP72O76094 671 aaKnown RBP16.6■□□□□ 0.25
PRKCB-210ENST00000498739 SESN2P58004 480 aaPredicted RBP16.6■□□□□ 0.25
PRKCB-210ENST00000498739 DAB2P98082 770 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 XIAPP98170 497 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 CDK16Q00536 496 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 ILF3Q12906 894 aaKnown RBP eCLIP16.6■□□□□ 0.258e-8■■■■■ 37
PRKCB-210ENST00000498739 DNAJC3Q13217 504 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 ZCCHC8Q6NZY4 707 aaKnown RBP16.6■□□□□ 0.25
PRKCB-210ENST00000498739 ADGRG6Q86SQ4 1221 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 GLRX5Q86SX6 157 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 SDR16C5Q8N3Y7 309 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 ZNF398Q8TD17 642 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 STYXQ8WUJ0 223 aa16.6■□□□□ 0.25
PRKCB-210ENST00000498739 SCG3Q8WXD2 468 aaKnown RBP16.6■□□□□ 0.25
PRKCB-210ENST00000498739 CPT1BQ92523 772 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms