RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 AAR2Q9Y312 384 aaKnown RBP1.44□□□□□ -2.18
XRN1-214ENST00000498077 L3MBTL1Q9Y468 752 aa1.44□□□□□ -2.18
XRN1-214ENST00000498077 IGKV1D-8A0A087WSZ0 117 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SAA2-SAA4A0A096LPE2 208 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 A0A1W2PQ67 120 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 IGKV2-29A2NJV5 120 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 TMEM218A2RU14 115 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 GAGE10A6NGK3 116 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DNM1LO00429 736 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RFXANKO14593 260 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 OGTO15294 1046 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DUSP11O75319 330 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 VPS26AO75436 327 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ENDOD1O94919 500 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NDST3O95803 873 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TUBB4AP04350 444 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 IGKV3-11P04433 115 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TUBBP07437 444 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TMEM191BP0C7N4 346 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NCF1P14598 390 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 AMD1P17707 334 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC6A2P23975 617 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 FCARP24071 287 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 STX2P32856 288 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SERPINB6P35237 376 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC11A2P49281 568 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RAB13P51153 203 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 HSD17B4P51659 736 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 VAV2P52735 878 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RAB38P57729 211 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TUBB4BP68371 445 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 FOXM1Q08050 763 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SIGLEC14Q08ET2 396 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TUBB3Q13509 450 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TUBB2AQ13885 445 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CWF19L2Q2TBE0 894 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 AP5B1Q2VPB7 878 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TMEM30BQ3MIR4 351 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF569Q5MCW4 686 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 HYIQ5T013 277 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PDSS1Q5T2R2 415 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CST9Q5W186 159 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC6A19Q695T7 634 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CNKSR3Q6P9H4 555 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CES3Q6UWW8 571 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 KIAA1324Q6UXG2 1013 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 CEP68Q76N32 757 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NET1Q7Z628 596 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 ADGRG6Q86SQ4 1221 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TAX1BP1Q86VP1 789 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 VRK3Q8IV63 474 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 OR2L8Q8NGY9 312 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CEP70Q8NHQ1 597 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SSC4DQ8WTU2 575 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TFAP2CQ92754 450 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DAZAP1Q96EP5 407 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 MED30Q96HR3 178 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DOCK7Q96N67 2140 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF582Q96NG8 517 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 TTC1Q99614 292 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SEMA3CQ99985 751 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TUBB2BQ9BVA1 445 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TRIM31Q9BZY9 425 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DRC3Q9H069 523 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 NXF5Q9H1B4 397 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLITRK6Q9H5Y7 841 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ZNF576Q9H609 170 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TREM1Q9NP99 234 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 DDX4Q9NQI0 724 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 ABCB8Q9NUT2 735 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ASF1BQ9NVP2 202 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ALKBH4Q9NXW9 302 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 FNIP2Q9P278 1114 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 LIMA1Q9UHB6 759 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 FBXO2Q9UK22 296 aaPredicted RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 TRIM33Q9UPN9 1127 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 INSL6Q9Y581 213 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SEC23IPQ9Y6Y8 1000 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 CDC42BPAQ5VT25 1732 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CDC42BPBQ9Y5S2 1711 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ADAMTS20P59510 1910 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 IGKV1D-17A0A075B6S4 117 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TRAV8-2A0A0B4J237 113 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 TRAV34A0A0B4J273 112 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ERICH2A1L162 156 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ARHGAP42A6NI28 874 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 SLC15A5A6NIM6 579 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 hCG_1984214I3L0E3 225 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CBX4O00257 560 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 RGS13O14921 159 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 ADAMTS3O15072 1205 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CTIFO43310 598 aaKnown RBP1.43□□□□□ -2.18
XRN1-214ENST00000498077 SGCEO43556 437 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 CILPO75339 1184 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 LRCH4O75427 683 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 KRT33AO76009 404 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 MBP02144 154 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PCCBP05166 539 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 PGRP06401 933 aa1.43□□□□□ -2.18
XRN1-214ENST00000498077 FAM87AP0C7U9 286 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms