RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TPSD1Q9BZJ3 242 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 TKTL2Q9H0I9 626 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 P2RY12Q9H244 342 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 COQ10BQ9H8M1 238 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 AKIRIN1Q9H9L7 192 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 TM9SF3Q9HD45 589 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 Q9N2J8 555 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 SPG21Q9NZD8 308 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 RNF181Q9P0P0 153 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 MGAT4CQ9UBM8 478 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 DNAJB4Q9UDY4 337 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 FAM153AQ9UHL3 310 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 HACL1Q9UJ83 578 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 TRMT6Q9UJA5 497 aaKnown RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 PTBP2Q9UKA9 531 aaKnown RBP6.09□□□□□ -1.43
BRCA1-224ENST00000497488 CCPG1Q9ULG6 757 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 HECW2Q9P2P5 1572 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 DIP2CQ9Y2E4 1556 aa6.09□□□□□ -1.43
BRCA1-224ENST00000497488 MAGI2Q86UL8 1455 aa6.09□□□□□ -1.44
BRCA1-224ENST00000497488 BCORL1Q5H9F3 1711 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 SUPT6HQ7KZ85 1726 aaKnown RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 DHX29Q7Z478 1369 aaKnown RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 ADAMTSL3P82987 1691 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 MADDQ8WXG6 1647 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 A0A0B4J203 849 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 A0A0B4J293 547 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 ELOVL7A1L3X0 281 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 C5orf51A6NDU8 294 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 H3BQ06 376 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 SLC16A3O15427 465 aaKnown RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 MOSPD3O75425 235 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 DAB1O75553 588 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 CNTN5O94779 1100 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 HIST1H2ABP04908 130 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 C8AP07357 584 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 RNASE1P07998 156 aaKnown RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 RHOP08100 348 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 KRT5P13647 590 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 GJA1P17302 382 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 GNAZP19086 355 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 HIST1H2ADP20671 130 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 SFPQP23246 707 aaKnown RBP eCLIP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 TMOD1P28289 359 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 FRKP42685 505 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 HNRNPMP52272 730 aaKnown RBP eCLIP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 SUMO2P61956 95 aaKnown RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 GPC5P78333 572 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 PMP22Q01453 160 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 NHLH2Q02577 135 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 GBE1Q04446 702 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 GAB1Q13480 694 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 RIPK1Q13546 671 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 SLC39A14Q15043 492 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 ME3Q16798 604 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 ZNF568Q3ZCX4 644 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 ATP13A5Q4VNC0 1218 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 RIPPLY2Q5TAB7 128 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 CENPPQ6IPU0 288 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 SLC27A1Q6PCB7 646 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 TEX38Q6PEX7 206 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 PSRC1Q6PGN9 363 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 C16orf87Q6PH81 154 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 FIP1L1Q6UN15 594 aaKnown RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 TMEM182Q6ZP80 229 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 PTCHD4Q6ZW05 846 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 RUFY3Q7L099 469 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 HIST3H2AQ7L7L0 130 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 AGBL3Q8NEM8 1001 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 TMEM170AQ8WVE7 144 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 RNF31Q96EP0 1072 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 LOXL4Q96JB6 756 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 THUMPD2Q9BTF0 503 aaKnown RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 RNF26Q9BY78 433 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 KCNK15Q9H427 330 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 NGBQ9NPG2 151 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 DDX4Q9NQI0 724 aaKnown RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 PNPLA3Q9NST1 481 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 PRMT7Q9NVM4 692 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-224ENST00000497488 SIRT5Q9NXA8 310 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 FBXO40Q9UH90 709 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 ICKQ9UPZ9 632 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 DTX4Q9Y2E6 619 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 CARD8Q9Y2G2 431 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 MAP3K1Q13233 1512 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 KIDINS220Q9ULH0 1771 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 MLH3Q9UHC1 1453 aa6.08□□□□□ -1.44
BRCA1-224ENST00000497488 NPHP3Q7Z494 1330 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 TARSL2A2RTX5 802 aaKnown RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SH3D21A4FU49 640 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SDR42E2A6NKP2 422 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 SELENOFO60613 162 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 RSL1D1O76021 490 aaKnown RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 ADCY5O95622 1261 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 GH1P01241 217 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 IL1AP01583 271 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 CYP1A1P04798 512 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-224ENST00000497488 FESP07332 822 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 H2AFB1P0C5Y9 115 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 H2AFB2P0C5Z0 115 aa6.07□□□□□ -1.44
BRCA1-224ENST00000497488 C8orf89P0DMQ9 161 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms