RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 COX14Q96I36 57 aa19.61■□□□□ 0.73
SCAMP3-209ENST00000497470 SPATA16Q9BXB7 569 aa19.61■□□□□ 0.73
SCAMP3-209ENST00000497470 ASB8Q9H765 288 aa19.61■□□□□ 0.73
SCAMP3-209ENST00000497470 CATSPERZQ9NTU4 200 aa19.61■□□□□ 0.73
SCAMP3-209ENST00000497470 INTS10Q9NVR2 710 aaKnown RBP19.61■□□□□ 0.73
SCAMP3-209ENST00000497470 COQ6Q9Y2Z9 468 aa19.61■□□□□ 0.73
SCAMP3-209ENST00000497470 FANCMQ8IYD8 2048 aa19.61■□□□□ 0.73
SCAMP3-209ENST00000497470 A0A0U1RQS6 177 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 TCRBV9S1A1TA0A576 114 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 FAM159BA6NKW6 160 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 A6NNZ2 444 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 F8W8V4 182 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 QSOX1O00391 747 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 TNFRSF10CO14798 259 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 SLC31A1O15431 190 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 BUD23O43709 281 aaKnown RBP19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 KELP23276 732 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 GPR1P46091 355 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 KIAA1024LP59773 190 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 PTPRCAPQ14761 206 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 STAT4Q14765 748 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 NAA30Q147X3 362 aaPredicted RBP19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 IRF4Q15306 451 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 PACS1Q6VY07 963 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 LRRC6Q86X45 466 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 NXPE1Q8N323 547 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 SKA1Q96BD8 255 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 HIC2Q96JB3 615 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 CYTH2Q99418 400 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 ZCCHC2Q9C0B9 1178 aaKnown RBP19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 ACSS3Q9H6R3 686 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 RMI1Q9H9A7 625 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 EBF2Q9HAK2 575 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 PHPT1Q9NRX4 125 aaPredicted RBP19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 C20orf96Q9NUD7 363 aaPredicted RBP19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 ARGLU1Q9NWB6 273 aaPredicted RBP19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 VPS18Q9P253 973 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 CORO1CQ9ULV4 474 aaPredicted RBP19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 MYLKQ15746 1914 aa19.6■□□□□ 0.73
SCAMP3-209ENST00000497470 A0A087WUV0 522 aaPredicted RBP19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 KLHL33A6NCF5 533 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 PRR23AA6NEV1 266 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 MEI4A8MW99 385 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 CD3EAPO15446 510 aaKnown RBP19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 RIPK2O43353 540 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 VEGFDO43915 354 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 C1QAP02745 245 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 MYCLP1P12525 358 aaPredicted RBP19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 SSTR1P30872 391 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 IGFALSP35858 605 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 RASA2Q15283 850 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 ATP13A5Q4VNC0 1218 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 LYSMD4Q5XG99 296 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 RAET1GQ6H3X3 334 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 FAM151BQ6UXP7 276 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 RFLNAQ6ZTI6 216 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 CILP2Q8IUL8 1156 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 PHYKPLQ8IUZ5 450 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 CFAP36Q96G28 342 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 SERAC1Q96JX3 654 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 ZNF514Q96K75 400 aaPredicted RBP19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 BMFQ96LC9 184 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 HSPA12BQ96MM6 686 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 WDR26Q9H7D7 661 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 TRIM39Q9HCM9 518 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 ZDHHC3Q9NYG2 299 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 CNOT6Q9ULM6 557 aaKnown RBP19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 PCDHGA5Q9Y5G8 931 aa19.59■□□□□ 0.73
SCAMP3-209ENST00000497470 FADS2P1A8MWK0 482 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 RAD51BO15315 384 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 TCEA3O75764 348 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 SLC4A1P02730 911 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 GSTM1P09488 218 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 NUDT17P0C025 328 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 GNSP15586 552 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 RPS3P23396 243 aaKnown RBP eCLIP19.58■□□□□ 0.722e-9■■■□□ 16
SCAMP3-209ENST00000497470 ACRV1P26436 265 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 MAT2AP31153 395 aaKnown RBP19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 PTGER3P43115 390 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 LEPRP48357 1165 aaKnown RBP19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 CDK3Q00526 305 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 GSTM4Q03013 218 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 PTK2BQ14289 1009 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 INPP5AQ14642 412 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 KLHL38Q2WGJ6 581 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 TEDDM1Q5T9Z0 273 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 CES3Q6UWW8 571 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 CEP68Q76N32 757 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 C2CD4AQ8NCU7 369 aaPredicted RBP19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 SCARF2Q96GP6 870 aaPredicted RBP19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 CCDC77Q9BR77 488 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 APOOQ9BUR5 198 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 SUDS3Q9H7L9 328 aaPredicted RBP19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 VPS37BQ9H9H4 285 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 MBNL1Q9NR56 388 aaKnown RBP19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 COMMD10Q9Y6G5 202 aa19.58■□□□□ 0.72
SCAMP3-209ENST00000497470 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.57■□□□□ 0.72
SCAMP3-209ENST00000497470 A0A1W2PR77 199 aa19.57■□□□□ 0.72
SCAMP3-209ENST00000497470 CFAP99D6REC4 459 aa19.57■□□□□ 0.72
SCAMP3-209ENST00000497470 AP2A2O94973 939 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms