RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 ADAMTS14Q8WXS8 1223 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 PDXPQ96GD0 296 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 SCARF2Q96GP6 870 aaPredicted RBP11.39□□□□□ -0.59
HLA-B-254ENST00000497377 COX14Q96I36 57 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 SPATA16Q9BXB7 569 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 TCEAL2Q9H3H9 227 aaPredicted RBP11.39□□□□□ -0.59
HLA-B-254ENST00000497377 RMI1Q9H9A7 625 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 CYP4F12Q9HCS2 524 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 VPS18Q9P253 973 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 PAK5Q9P286 719 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 PNMA8BQ9ULN7 279 aaPredicted RBP11.39□□□□□ -0.59
HLA-B-254ENST00000497377 DOLKQ9UPQ8 538 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 PKP3Q9Y446 797 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 SPO11Q9Y5K1 396 aa11.39□□□□□ -0.59
HLA-B-254ENST00000497377 GOLGA4Q13439 2230 aaKnown RBP11.38□□□□□ -0.59
HLA-B-254ENST00000497377 C2orf81A6NN90 581 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 GPR89AB7ZAQ6 455 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 METTL18O95568 372 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 CRTAMO95727 393 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 AP2A1O95782 977 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 IFNB1P01574 187 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 SLC4A1P02730 911 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 GPR89BP0CG08 455 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 CKMT1AP12532 417 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 BPIP17213 487 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 LPOP22079 712 aaPredicted RBP11.38□□□□□ -0.59
HLA-B-254ENST00000497377 RPIAP49247 311 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 DAB2P98082 770 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 SNX1Q13596 522 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 TAF1AQ15573 450 aaPredicted RBP11.38□□□□□ -0.59
HLA-B-254ENST00000497377 GPR26Q8NDV2 337 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 BRSK1Q8TDC3 778 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 AGAP2Q99490 1192 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 BOCQ9BWV1 1114 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 CLPBQ9H078 707 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 TRNAU1APQ9NX07 287 aaKnown RBP11.38□□□□□ -0.59
HLA-B-254ENST00000497377 TOR4AQ9NXH8 423 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 IL17CQ9P0M4 197 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 MOSPD1Q9UJG1 213 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 SNX12Q9UMY4 172 aa11.38□□□□□ -0.59
HLA-B-254ENST00000497377 FADS2P1A8MWK0 482 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 E7EVH7 732 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 PGRMC1O00264 195 aaKnown RBP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 AURKAO14965 403 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 INPP4BO15327 924 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 YY2O15391 372 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 STX7O15400 261 aaKnown RBP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 RFPL3O75679 317 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 GAS8O95995 478 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 ATP1A1P05023 1023 aaKnown RBP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 GP1BAP07359 652 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 TCP1P17987 556 aaKnown RBP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 SPAM1P38567 509 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 SLC19A1P41440 591 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 ACADVLP49748 655 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 E2F1Q01094 437 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 ILF3Q12906 894 aaKnown RBP eCLIP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 C1orf61Q13536 156 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 LRP8Q14114 963 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 NR0B2Q15466 257 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 DEFB133Q30KQ1 61 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 ALS2CLQ60I27 953 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 DENND5AQ6IQ26 1287 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 GSTA5Q7RTV2 222 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 RAB44Q7Z6P3 723 aaPredicted RBP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 SLCO6A1Q86UG4 719 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 PHYKPLQ8IUZ5 450 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 GALNT15Q8N3T1 639 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 ACTRT1Q8TDG2 376 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 APOLD1Q96LR9 279 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 VPS35Q96QK1 796 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 OSBPL9Q96SU4 736 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 APOL2Q9BQE5 337 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 GSDMCQ9BYG8 508 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 CARS2Q9HA77 564 aaKnown RBP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 MRPL40Q9NQ50 206 aaKnown RBP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 RAB6BQ9NRW1 208 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 KCND1Q9NSA2 647 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 ANGPTL2Q9UKU9 493 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 CNOT6Q9ULM6 557 aaKnown RBP11.37□□□□□ -0.59
HLA-B-254ENST00000497377 PYCARDQ9ULZ3 195 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 SUFUQ9UMX1 484 aa11.37□□□□□ -0.59
HLA-B-254ENST00000497377 ZNF106Q9H2Y7 1883 aaKnown RBP11.36□□□□□ -0.59
HLA-B-254ENST00000497377 NCOR2Q9Y618 2525 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 GOLGA6L10A0A0M3HER8 536 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 USP27XA6NNY8 438 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 AP3B1O00203 1094 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 VEGFDO43915 354 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 USP12O75317 370 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 SUN1O94901 812 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 SLC25A14O95258 325 aaPredicted RBP11.36□□□□□ -0.59
HLA-B-254ENST00000497377 ASMTLO95671 621 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 HADHAP40939 763 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 GNPDA1P46926 289 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 LMAN1P49257 510 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 GNG11P61952 73 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 FOXC1Q12948 553 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 SEMA5AQ13591 1074 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 LAMB3Q13751 1172 aa11.36□□□□□ -0.59
HLA-B-254ENST00000497377 ITGA9Q13797 1035 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms