RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 E7ESA3 106 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 TRIM3O75382 744 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 CYP2A6P11509 494 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 TBXAS1P24557 533 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 STARP49675 285 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 NDST1P52848 882 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 CASP7P55210 303 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 MRPS5P82675 430 aaKnown RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 RPA4Q13156 261 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 PLD1Q13393 1074 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 BCL7AQ4VC05 210 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 YIF1BQ5BJH7 314 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 PPP1R26Q5T8A7 1209 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 TMEM198Q66K66 360 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ZNF704Q6ZNC4 412 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 KRT74Q7RTS7 529 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 RETREG3Q86VR2 466 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 PROSER1Q86XN7 944 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ZC3H3Q8IXZ2 948 aaKnown RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ATAD1Q8NBU5 361 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 OR5T2Q8NGG2 359 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 RDH11Q8TC12 318 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 SLC7A6Q92536 515 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 SAE1Q9UBE0 346 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 PHF11Q9UIL8 331 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ERVH48-1M5A8F1 160 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 SLC22A5O76082 557 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 KCNK2O95069 426 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 MT-ND1P03886 318 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ARSFP54793 590 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 SLC12A3P55017 1021 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 PRKCDQ05655 676 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM209BQ5JX69 171 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 LYPD8Q6UX82 237 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ARHGAP36Q6ZRI8 547 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 FAM92BQ6ZTR7 304 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 DPH6Q7L8W6 267 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 DNAJC10Q8IXB1 793 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 GDPD1Q8N9F7 314 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 MUL1Q969V5 352 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ITPAQ9BY32 194 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ACE2Q9BYF1 805 aaPredicted RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ZC3H12CQ9C0D7 883 aaKnown RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 INTS7Q9NVH2 962 aaKnown RBP8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ADGRE2Q9UHX3 823 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 ADAM28Q9UKQ2 775 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 TMPRSS11EQ9UL52 423 aa8.15□□□□□ -1.1
CRNKL1-205ENST00000496549 COL16A1Q07092 1604 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 B4GAT1O43505 415 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 RFPL3O75679 317 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 CABYRO75952 493 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 ATG7O95352 703 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 GLRBP48167 497 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 NPY2RP49146 381 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 YWHAZP63104 245 aaKnown RBP8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 DEFA5Q01523 94 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 HSF2Q03933 536 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 PCLAFQ15004 111 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 BRAT1Q6PJG6 821 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 MIER2Q8N344 545 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 VWA5B2Q8N398 1253 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 PARP16Q8N5Y8 322 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 DHX38Q92620 1227 aaKnown RBP8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 MARVELD3Q96A59 401 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 AP2M1Q96CW1 435 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 ERMAPQ96PL5 475 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 CHCHD6Q9BRQ6 235 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 PDGFDQ9GZP0 370 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 SPRTNQ9H040 489 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 RANBP3Q9H6Z4 567 aaPredicted RBP8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 SPON1Q9HCB6 807 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 ACOXLQ9NUZ1 547 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 DUS2Q9NX74 493 aaKnown RBP8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 PCDHA1Q9Y5I3 950 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 CSADQ9Y600 493 aa8.15□□□□□ -1.11
CRNKL1-205ENST00000496549 ARHGEF33A8MVX0 844 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 KPNA3O00505 521 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 SOCS7O14512 581 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 CST1P01037 141 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 CSH1P0DML2 217 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 CSH2P0DML3 217 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 CRHBPP24387 322 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 POU1F1P28069 291 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 MAMLD1Q13495 774 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 GTF2H3Q13889 308 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 EMC2Q15006 297 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 GPR68Q15743 365 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 SYT16Q17RD7 645 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 ARL13AQ5H913 290 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 ZNF470Q6ECI4 717 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 DENND1BQ6P3S1 775 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 CHMP1BQ7LBR1 199 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 NRARPQ7Z6K4 114 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 HIPK1Q86Z02 1210 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 YIPF7Q8N8F6 280 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 OR7G3Q8NG95 312 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 MYLPFQ96A32 169 aa8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 EIF2AK1Q9BQI3 630 aaKnown RBP8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 GATA5Q9BWX5 397 aaPredicted RBP8.14□□□□□ -1.11
CRNKL1-205ENST00000496549 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms