RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 C9orf172C9J069 976 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 APOL1O14791 398 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 SLC4A1P02730 911 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 CCL4P13236 92 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 TNNT1P13805 278 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 MPSTP25325 297 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 CSF2RBP32927 897 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 SPINT3P49223 89 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 IFI35P80217 286 aaPredicted RBP12.85□□□□□ -0.35
FN1-226ENST00000496542 LRP8Q14114 963 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 GALNT3Q14435 633 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 CLPPQ16740 277 aaPredicted RBP12.85□□□□□ -0.35
FN1-226ENST00000496542 ZNF574Q6ZN55 896 aaPredicted RBP12.85□□□□□ -0.35
FN1-226ENST00000496542 KDELC2Q7Z4H8 507 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 ZNF605Q86T29 641 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 CCHCR1Q8TD31 782 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 SLC37A2Q8TED4 501 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 CCDC42Q96M95 316 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 WDR24Q96S15 920 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 LYSMD1Q96S90 227 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 CHP1Q99653 195 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 MLPHQ9BV36 600 aaPredicted RBP12.85□□□□□ -0.35
FN1-226ENST00000496542 MAK16Q9BXY0 300 aaKnown RBP12.85□□□□□ -0.35
FN1-226ENST00000496542 ADGRE3Q9BY15 652 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 FAM83DQ9H4H8 585 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 ABHD10Q9NUJ1 306 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 PKD2L2Q9NZM6 624 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 VPS18Q9P253 973 aa12.85□□□□□ -0.35
FN1-226ENST00000496542 PCYT1BQ9Y5K3 369 aaPredicted RBP12.85□□□□□ -0.35
FN1-226ENST00000496542 C3orf70A6NLC5 250 aaPredicted RBP12.84□□□□□ -0.35
FN1-226ENST00000496542 FADS2P1A8MWK0 482 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 ANKRD66B4E2M5 251 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 HGSO14964 777 aaPredicted RBP12.84□□□□□ -0.35
FN1-226ENST00000496542 EFSO43281 561 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 DNAJC6O75061 913 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 MFAP3LO75121 409 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 EML2O95834 649 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 PIRTP0C851 137 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 ACP5P13686 325 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 PLA2G2AP14555 144 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 LIMK2P53671 638 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 DYNLT1P63172 113 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 PDK1Q15118 436 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 ODF2Q5BJF6 829 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 MANEAQ5SRI9 462 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 HENMT1Q5T8I9 393 aaKnown RBP12.84□□□□□ -0.35
FN1-226ENST00000496542 TMEM164Q5U3C3 297 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 ALS2CLQ60I27 953 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 SLC9A4Q6AI14 798 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 NPNTQ6UXI9 565 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 B4GALNT4Q76KP1 1039 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 CHST15Q7LFX5 561 aaPredicted RBP12.84□□□□□ -0.35
FN1-226ENST00000496542 LYSMD3Q7Z3D4 306 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 RFX6Q8HWS3 928 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 VSTM4Q8IW00 320 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 RAVER1Q8IY67 606 aaKnown RBP12.84□□□□□ -0.35
FN1-226ENST00000496542 CNTD1Q8N815 330 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 OR4D9Q8NGE8 314 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 AHCYL2Q96HN2 611 aaKnown RBP12.84□□□□□ -0.35
FN1-226ENST00000496542 AGAP3Q96P47 875 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 SLC38A3Q99624 504 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 BRD8Q9H0E9 1235 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 TMEM9Q9P0T7 183 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 CNOT6Q9ULM6 557 aaKnown RBP12.84□□□□□ -0.35
FN1-226ENST00000496542 KCNK6Q9Y257 313 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 TENM4Q6N022 2769 aa12.84□□□□□ -0.35
FN1-226ENST00000496542 BOD1L1Q8NFC6 3051 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 ZNF487B1APH4 448 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 PPP1R12AO14974 1030 aaPredicted RBP12.83□□□□□ -0.36
FN1-226ENST00000496542 SNX2O60749 519 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 ZIC2O95409 532 aaPredicted RBP12.83□□□□□ -0.36
FN1-226ENST00000496542 THRAP10827 490 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 ARHGAP25P42331 645 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 FASLGP48023 281 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 NFATC2Q13469 925 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 TRA2AQ13595 282 aaKnown RBP eCLIP12.83□□□□□ -0.36
FN1-226ENST00000496542 PCSK7Q16549 785 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 RHOT2Q8IXI1 618 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 SFRP1Q8N474 314 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 OR10G6Q8NH81 332 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 JPH3Q8WXH2 748 aaPredicted RBP12.83□□□□□ -0.36
FN1-226ENST00000496542 PMEPA1Q969W9 287 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 RNF25Q96BH1 459 aaPredicted RBP12.83□□□□□ -0.36
FN1-226ENST00000496542 SGF29Q96ES7 293 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 SPATA16Q9BXB7 569 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 NHEJ1Q9H9Q4 299 aaPredicted RBP12.83□□□□□ -0.36
FN1-226ENST00000496542 ARFGAP3Q9NP61 516 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 TBC1D29Q9UFV1 150 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 SHOC2Q9UQ13 582 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 HYOU1Q9Y4L1 999 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 PCDHB11Q9Y5F2 797 aa12.83□□□□□ -0.36
FN1-226ENST00000496542 MYO18BQ8IUG5 2567 aa12.82□□□□□ -0.36
FN1-226ENST00000496542 RGSL1A5PLK6 1076 aa12.82□□□□□ -0.36
FN1-226ENST00000496542 SPOPO43791 374 aa12.82□□□□□ -0.36
FN1-226ENST00000496542 DUX1O43812 170 aa12.82□□□□□ -0.36
FN1-226ENST00000496542 MTA2O94776 668 aa12.82□□□□□ -0.36
FN1-226ENST00000496542 FGF3P11487 239 aaPredicted RBP12.82□□□□□ -0.36
FN1-226ENST00000496542 ZFXP17010 805 aaPredicted RBP12.82□□□□□ -0.36
FN1-226ENST00000496542 CD82P27701 267 aa12.82□□□□□ -0.36
FN1-226ENST00000496542 CSTF2P33240 577 aaKnown RBP eCLIP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms