RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 PKD2L2Q9NZM6 624 aa14.17□□□□□ -0.14
VTI1A-209ENST00000496445 VPS18Q9P253 973 aa14.17□□□□□ -0.14
VTI1A-209ENST00000496445 PISDQ9UG56 409 aa14.17□□□□□ -0.14
VTI1A-209ENST00000496445 TFR2Q9UP52 801 aa14.17□□□□□ -0.14
VTI1A-209ENST00000496445 PRKAB1Q9Y478 270 aa14.17□□□□□ -0.14
VTI1A-209ENST00000496445 HELZ2Q9BYK8 2649 aaKnown RBP14.17□□□□□ -0.14
VTI1A-209ENST00000496445 RHPN2P1A8MT19 583 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 PSTPIP1O43586 416 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 SPOPO43791 374 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 CPNE6O95741 557 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 MT-CYBP00156 380 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-209ENST00000496445 PIRTP0C851 137 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 ZFXP17010 805 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-209ENST00000496445 PTPN3P26045 913 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 CD1CP29017 333 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 CSF2RBP32927 897 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 MARCKSL1P49006 195 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 HADHBP55084 474 aaKnown RBP14.16□□□□□ -0.14
VTI1A-209ENST00000496445 LRP8Q14114 963 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 C16orf72Q14CZ0 275 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 SLC14A2Q15849 920 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 ZNF574Q6ZN55 896 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-209ENST00000496445 KDELC2Q7Z4H8 507 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 NT5DC3Q86UY8 548 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 SPATA22Q8NHS9 363 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 SNRNP27Q8WVK2 155 aaKnown RBP14.16□□□□□ -0.14
VTI1A-209ENST00000496445 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 ADGRE3Q9BY15 652 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 SLC25A51Q9H1U9 297 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 FAM83DQ9H4H8 585 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 SAE1Q9UBE0 346 aaPredicted RBP14.16□□□□□ -0.14
VTI1A-209ENST00000496445 ACSL6Q9UKU0 697 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 ZNF106Q9H2Y7 1883 aaKnown RBP14.16□□□□□ -0.14
VTI1A-209ENST00000496445 SDK2Q58EX2 2172 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 PIEZO2Q9H5I5 2752 aa14.16□□□□□ -0.14
VTI1A-209ENST00000496445 PRAMEF33A0A0G2JMD5 474 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 RGSL1A5PLK6 1076 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 PRAMEF10O60809 474 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 LCA5LO95447 670 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 ASMTLO95671 621 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 JMJD7P0C870 316 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 ALDH4A1P30038 563 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 CD68P34810 354 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-209ENST00000496445 CFHR1Q03591 330 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 LLGL1Q15334 1064 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 PCSK7Q16549 785 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 TEX44Q53QW1 395 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 PHF19Q5T6S3 580 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 NKAIN2Q5VXU1 208 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 PIM3Q86V86 326 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 JAMLQ86YT9 394 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 SFRP1Q8N474 314 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 RCBTB1Q8NDN9 531 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 GPR26Q8NDV2 337 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 CCHCR1Q8TD31 782 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 SLC37A2Q8TED4 501 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 CCDC97Q96F63 343 aaPredicted RBP14.15□□□□□ -0.14
VTI1A-209ENST00000496445 ZFYVE1Q9HBF4 777 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 GLOD4Q9HC38 313 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 FOXJ2Q9P0K8 574 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 SHOC2Q9UQ13 582 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 ZNF711Q9Y462 761 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 ALG6Q9Y672 507 aa14.15□□□□□ -0.14
VTI1A-209ENST00000496445 IGHV1OR21-1A0A087WYE8 117 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 A0A0A6YYK5 440 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-209ENST00000496445 IGHV5-10-1A0A0J9YXX1 117 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 A6NCN8 305 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 C9orf172C9J069 976 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 K7ENP7 123 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 ERVH48-1M5A8F1 160 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 CST8O60676 142 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 SLC4A1P02730 911 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 MAGEA1P43355 309 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 GPR3P46089 330 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 FASLGP48023 281 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 DCDC1P59894 354 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 CDK18Q07002 472 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 VAC14Q08AM6 782 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 WASHC5Q12768 1159 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 SRSF6Q13247 344 aaKnown RBP14.14□□□□□ -0.15
VTI1A-209ENST00000496445 PEX6Q13608 980 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 ZNF648Q5T619 568 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-209ENST00000496445 ALS2CLQ60I27 953 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 KAZNQ674X7 775 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 INO80CQ6PI98 192 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-209ENST00000496445 SPOCD1Q6ZMY3 1216 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 USP53Q70EK8 1073 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 TMC3Q7Z5M5 1100 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 ZNF761Q86XN6 746 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-209ENST00000496445 PMEPA1Q969W9 287 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 TMEM159Q96B96 161 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 CCDC74BQ96LY2 380 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 TEKT5Q96M29 485 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 TRIM5Q9C035 493 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 ARFGAP3Q9NP61 516 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 TMEM9Q9P0T7 183 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 NFKBIL1Q9UBC1 381 aaPredicted RBP14.14□□□□□ -0.15
VTI1A-209ENST00000496445 ZNHIT2Q9UHR6 403 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 KCNK6Q9Y257 313 aa14.14□□□□□ -0.15
VTI1A-209ENST00000496445 SPO11Q9Y5K1 396 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms