RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 AK4P27144 223 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-213ENST00000496347 PTPN7P35236 360 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 TNNT3P45378 269 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-213ENST00000496347 GPR3P46089 330 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 INHBCP55103 352 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 MAZP56270 477 aaKnown RBP15.6■□□□□ 0.09
HDAC4-213ENST00000496347 TLE3Q04726 772 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 ADCY2Q08462 1091 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 XRCC4Q13426 336 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 MAP9Q49MG5 647 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 CCDC70Q6NSX1 233 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 CLEC14AQ86T13 490 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 SFTPA2Q8IWL1 248 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 SPACA3Q8IXA5 215 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 TXLNBQ8N3L3 684 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 SPATA22Q8NHS9 363 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 WDR24Q96S15 920 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 KLHL8Q9P2G9 620 aaPredicted RBP15.6■□□□□ 0.09
HDAC4-213ENST00000496347 FAM153AQ9UHL3 310 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 CNOT6Q9ULM6 557 aaKnown RBP15.6■□□□□ 0.09
HDAC4-213ENST00000496347 EFR3BQ9Y2G0 817 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 TMEM98Q9Y2Y6 226 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 ST14Q9Y5Y6 855 aa15.6■□□□□ 0.09
HDAC4-213ENST00000496347 FASNP49327 2511 aaKnown RBP15.6■□□□□ 0.09
HDAC4-213ENST00000496347 CCDC66A2RUB6 948 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 RCCD1A6NED2 376 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 RHPN2P1A8MT19 583 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 PLD2O14939 933 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 PJA2O43164 708 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 DNAJC6O75061 913 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 PMPCBO75439 489 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 ECEL1O95672 775 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 EPOP01588 193 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 SLC4A1P02730 911 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 VAV2P52735 878 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 UCNP55089 124 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 CCDC173Q0VFZ6 552 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 BIRC2Q13490 618 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 MARK2Q7KZI7 788 aaKnown RBP15.59■□□□□ 0.09
HDAC4-213ENST00000496347 TMC3Q7Z5M5 1100 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 ZC3H18Q86VM9 953 aaKnown RBP15.59■□□□□ 0.09
HDAC4-213ENST00000496347 PHYKPLQ8IUZ5 450 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 NAGSQ8N159 534 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 Q8N9G6 341 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-213ENST00000496347 KCNE4Q8WWG9 221 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 HTR3CQ8WXA8 447 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 HAUS1Q96CS2 278 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 EID2BQ96D98 161 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 CCDC97Q96F63 343 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-213ENST00000496347 PRR11Q96HE9 360 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-213ENST00000496347 PLEKHG4BQ96PX9 1271 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 FERMT1Q9BQL6 677 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 FOXP3Q9BZS1 431 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 TRABDQ9H4I3 376 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 EPB41L5Q9HCM4 733 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 TRHDEQ9UKU6 1024 aa15.59■□□□□ 0.09
HDAC4-213ENST00000496347 REXO2Q9Y3B8 237 aaKnown RBP15.59■□□□□ 0.09
HDAC4-213ENST00000496347 OAS3Q9Y6K5 1087 aaKnown RBP15.59■□□□□ 0.09
HDAC4-213ENST00000496347 ZNF189O75820 626 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-213ENST00000496347 ASMTLO95671 621 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 CPNE6O95741 557 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 ATP1A1P05023 1023 aaKnown RBP15.58■□□□□ 0.08
HDAC4-213ENST00000496347 PIRTP0C851 137 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 NFKB1P19838 968 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 CTNNA2P26232 953 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 ITPKBP27987 946 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 CDC25BP30305 580 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 CD68P34810 354 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-213ENST00000496347 FASLGP48023 281 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 WNT3AP56704 352 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 ZFP36L1Q07352 338 aaKnown RBP15.58■□□□□ 0.08
HDAC4-213ENST00000496347 MPP3Q13368 585 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 NOMO1Q15155 1222 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 LLGL1Q15334 1064 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 CCDC181Q5TID7 509 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 ZDHHC20Q5W0Z9 365 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 KDELC1Q6UW63 502 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 RAD9BQ6WBX8 426 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 B4GALNT4Q76KP1 1039 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 RAB11FIP2Q7L804 512 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 KDELC2Q7Z4H8 507 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 SLITRK4Q8IW52 837 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 ZNF567Q8N184 647 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 TRAM1L1Q8N609 369 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 LRRC57Q8N9N7 239 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 FCRL5Q96RD9 977 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 BAG1Q99933 345 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-213ENST00000496347 HERPUD2Q9BSE4 406 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 SPATA16Q9BXB7 569 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 DPH1Q9BZG8 443 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 GPR63Q9BZJ6 419 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 CARD9Q9H257 536 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 SHOC2Q9UQ13 582 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 PCDHGA7Q9Y5G6 932 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 PCDHA3Q9Y5H8 950 aa15.58■□□□□ 0.08
HDAC4-213ENST00000496347 LOC285095A0A1B0GVY8 99 aa15.57■□□□□ 0.08
HDAC4-213ENST00000496347 NUAK1O60285 661 aa15.57■□□□□ 0.08
HDAC4-213ENST00000496347 TNFSF15O95150 251 aa15.57■□□□□ 0.08
HDAC4-213ENST00000496347 SLC2A4P14672 509 aa15.57■□□□□ 0.08
HDAC4-213ENST00000496347 HLA-DPA1P20036 260 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms