RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 HK3P52790 923 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 HNRNPKP61978 463 aaKnown RBP eCLIP19.29■□□□□ 0.68
HDAC4-212ENST00000495497 SUZ12Q15022 739 aaKnown RBP19.29■□□□□ 0.68
HDAC4-212ENST00000495497 MARK2Q7KZI7 788 aaKnown RBP19.29■□□□□ 0.68
HDAC4-212ENST00000495497 PIP4P1Q86T03 277 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 JAMLQ86YT9 394 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 NAXDQ8IW45 347 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 ZNF548Q8NEK5 533 aaPredicted RBP19.29■□□□□ 0.68
HDAC4-212ENST00000495497 LMX1AQ8TE12 382 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 RTKNQ9BST9 563 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 DLL3Q9NYJ7 618 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 ASIC3Q9UHC3 531 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 CDC23Q9UJX2 597 aa19.29■□□□□ 0.68
HDAC4-212ENST00000495497 PRSS38A1L453 326 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 H3BM21 787 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 GOLGA8MH3BSY2 632 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 FFAR2O15552 330 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 AVILO75366 819 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 RASGRP1O95267 797 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 TNFP01375 233 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 MAGEA6P43360 314 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 CRADDP78560 199 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 XIAPP98170 497 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 PRRT3Q5FWE3 981 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 LRRC8BQ6P9F7 803 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 EID2Q8N6I1 236 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 RHBDD1Q8TEB9 315 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 GLYATL1Q969I3 302 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 LRRC61Q9BV99 259 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 SLC13A1Q9BZW2 595 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 CLPBQ9H078 707 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 FAM96AQ9H5X1 160 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 CARS2Q9HA77 564 aaKnown RBP19.28■□□□□ 0.68
HDAC4-212ENST00000495497 SLC17A4Q9Y2C5 497 aa19.28■□□□□ 0.68
HDAC4-212ENST00000495497 PCYT1BQ9Y5K3 369 aaPredicted RBP19.28■□□□□ 0.68
HDAC4-212ENST00000495497 MROH6A6NGR9 719 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 TNFRSF10CO14798 259 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 PPFIA2O75334 1257 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 MTX2O75431 263 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 SLC25A14O95258 325 aaPredicted RBP19.27■□□□□ 0.68
HDAC4-212ENST00000495497 MGAT1P26572 445 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 GNPDA1P46926 289 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 PDE1BQ01064 536 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 PEX6Q13608 980 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 ZDHHC20Q5W0Z9 365 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 NAT8LQ8N9F0 302 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 BTN2A2Q8WVV5 523 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 ZNF778Q96MU6 729 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 RUNDC3BQ96NL0 473 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 NLE1Q9NVX2 485 aaPredicted RBP19.27■□□□□ 0.68
HDAC4-212ENST00000495497 SPASTQ9UBP0 616 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 SLC2A6Q9UGQ3 507 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 SUFUQ9UMX1 484 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 PRKAB1Q9Y478 270 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 PLEKHM1Q9Y4G2 1056 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 DGKBQ9Y6T7 804 aa19.27■□□□□ 0.68
HDAC4-212ENST00000495497 SCN8AQ9UQD0 1980 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 MYLKQ15746 1914 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 KIF2AO00139 706 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-212ENST00000495497 DNALI1O14645 258 aaPredicted RBP19.26■□□□□ 0.67
HDAC4-212ENST00000495497 GIPC1O14908 333 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 FLRT2O43155 660 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 AQP9O43315 295 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 PRAMEF1O95521 474 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 TUBB4AP04350 444 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 PRSS56P0CW18 603 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 GIMD1P0DJR0 217 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 CTSEP14091 401 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 SDHBP21912 280 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 ADRA1DP25100 572 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 IVDP26440 423 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 GRK6P43250 576 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 ID4P47928 161 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 ARSDP51689 593 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 CDK16Q00536 496 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 KHDC1Q4VXA5 237 aaKnown RBP19.26■□□□□ 0.67
HDAC4-212ENST00000495497 RNASEH2BQ5TBB1 312 aaKnown RBP19.26■□□□□ 0.67
HDAC4-212ENST00000495497 PDPK2PQ6A1A2 396 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 CAND1Q86VP6 1230 aaKnown RBP19.26■□□□□ 0.67
HDAC4-212ENST00000495497 CCL4L1Q8NHW4 92 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 GDAP1Q8TB36 358 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 ZNF398Q8TD17 642 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 STYXQ8WUJ0 223 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 RANBP9Q96S59 729 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 TRIM31Q9BZY9 425 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 TMEM168Q9H0V1 697 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 OR2AG1Q9H205 316 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 ASB8Q9H765 288 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 CHRAC1Q9NRG0 131 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 SYBUQ9NX95 663 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 ATXN10Q9UBB4 475 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 PCOLCE2Q9UKZ9 415 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 TCAF1Q9Y4C2 921 aa19.26■□□□□ 0.67
HDAC4-212ENST00000495497 ASCC3Q8N3C0 2202 aaKnown RBP19.25■□□□□ 0.67
HDAC4-212ENST00000495497 HEATR9A2RTY3 570 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 OR51F1A6NGY5 319 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 TRIM38O00635 465 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 CBFA2T3O75081 653 aa19.25■□□□□ 0.67
HDAC4-212ENST00000495497 SRP72O76094 671 aaKnown RBP19.25■□□□□ 0.67
HDAC4-212ENST00000495497 KCNA4P22459 653 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms