RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 NCAM2O15394 837 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 MED7O43513 233 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 SGTAO43765 313 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 PIP5K1CO60331 668 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 NOL4O94818 638 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 VNN2O95498 520 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 SETSIPP0DME0 302 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 VDRP11473 427 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 CDK4P11802 303 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 KRT5P13647 590 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 CCDC130P13994 396 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 HDCP19113 662 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 GDI1P31150 447 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 USP8P40818 1118 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 CCR2P41597 374 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 MAP3K7CLP57077 242 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 SNX16P57768 344 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 GPC5P78333 572 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 MRPS35P82673 323 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 GCNT1Q02742 428 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 GOLGA8FQ08AF8 430 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 GOLGA8DPQ0D2H9 430 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 HTR4Q13639 388 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 KCNJ12Q14500 433 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 LLGL1Q15334 1064 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 LONRF1Q17RB8 773 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 EXOC3L4Q17RC7 722 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 HSP90B2PQ58FF3 399 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 FAM78AQ5JUQ0 283 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 TANGO2Q6ICL3 276 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 TMEM270Q6UE05 265 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 RRAGAQ7L523 313 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 OVCH2Q7RTZ1 564 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 MON1AQ86VX9 555 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 TMC8Q8IU68 726 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 TMTC1Q8IUR5 882 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 ARID3BQ8IVW6 561 aaPredicted RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 MFSD6LQ8IWD5 586 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 CMTM8Q8IZV2 173 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 ARHGAP18Q8N392 663 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 C12orf29Q8N999 325 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 BPIFB1Q8TDL5 484 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 OVCA2Q8WZ82 227 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 SEMA4DQ92854 862 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 FGF14Q92915 247 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 FBXO32Q969P5 355 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 JAKMIP2Q96AA8 810 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 TMEM125Q96AQ2 219 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 PTCD3Q96EY7 689 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 LRIG1Q96JA1 1093 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 KCNK16Q96T55 309 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 NELL2Q99435 816 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 PKMYT1Q99640 499 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 HNRNPABQ99729 332 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 TUBGCP2Q9BSJ2 902 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 DUSP16Q9BY84 665 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 UBXN6Q9BZV1 441 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 ZNF518BQ9C0D4 1074 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 INTS2Q9H0H0 1204 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 SDCBP2Q9H190 292 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 NDST4Q9H3R1 872 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 KIF9Q9HAQ2 790 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 LRRC4Q9HBW1 653 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 APOBEC3GQ9HC16 384 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 ZNF334Q9HCZ1 680 aaPredicted RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 ARFGAP3Q9NP61 516 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 UBE2TQ9NPD8 197 aaPredicted RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 TLR8Q9NR97 1041 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 FAM49BQ9NUQ9 324 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 TBCCD1Q9NVR7 557 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 CWC15Q9P013 229 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 GCNT4Q9P109 453 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 CALCOCO1Q9P1Z2 691 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 RNF7Q9UBF6 113 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.66□□□□□ -1.66
RBM39-240ENST00000495293 CA14Q9ULX7 337 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 MRPS17Q9Y2R5 130 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 PPP2R2CQ9Y2T4 447 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 V9GYY5 206 aaPredicted RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 DENND4AQ7Z401 1863 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 PRUNE2Q8WUY3 3088 aa4.66□□□□□ -1.66
RBM39-240ENST00000495293 SPTBN5Q9NRC6 3674 aaKnown RBP4.66□□□□□ -1.66
RBM39-240ENST00000495293 GTPBP10A4D1E9 387 aaKnown RBP4.65□□□□□ -1.67
RBM39-240ENST00000495293 E9PLN8 166 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 F2RL2O00254 374 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 SLC9A3R1O14745 358 aaPredicted RBP4.65□□□□□ -1.67
RBM39-240ENST00000495293 CHADO15335 359 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 MOSPD3O75425 235 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 PAEPP09466 180 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 MBL2P11226 248 aaPredicted RBP4.65□□□□□ -1.67
RBM39-240ENST00000495293 RALAP11233 206 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 ATP1A3P13637 1013 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 GLULP15104 373 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 HMGA1P17096 107 aaKnown RBP4.65□□□□□ -1.67
RBM39-240ENST00000495293 MALP21145 153 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 VIPR2P41587 438 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 IFNAR2P48551 515 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 PPM1FP49593 454 aaPredicted RBP4.65□□□□□ -1.67
RBM39-240ENST00000495293 BCAT1P54687 386 aa4.65□□□□□ -1.67
RBM39-240ENST00000495293 RAD23BP54727 409 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms