RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 UBASH3AP57075 661 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 KCNC4Q03721 635 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 NIPAL4Q0D2K0 466 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 CPLX3Q8WVH0 158 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 FAF2Q96CS3 445 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 ZMYND15Q9H091 742 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 SLC39A1Q9NY26 324 aa23.05■■□□□ 1.28
COL27A1-208ENST00000494780 CNOT6Q9ULM6 557 aaKnown RBP23.05■■□□□ 1.28
COL27A1-208ENST00000494780 LUC7L2Q9Y383 392 aaKnown RBP23.05■■□□□ 1.28
COL27A1-208ENST00000494780 TRBV23OR9-2A0A075B6M9 112 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 PYCARD-AS1I3L0S3 204 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 DUX1O43812 170 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 PROSCO94903 275 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 KRT7P08729 469 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 UGT1A3P35503 534 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 RAB15P59190 212 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 CYP4F2P78329 520 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 ZNF761Q86XN6 746 aaPredicted RBP23.04■■□□□ 1.28
COL27A1-208ENST00000494780 WDR24Q96S15 920 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 SLC12A9Q9BXP2 914 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 FAM83DQ9H4H8 585 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 STN1Q9H668 368 aaKnown RBP23.04■■□□□ 1.28
COL27A1-208ENST00000494780 RMI1Q9H9A7 625 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 SARS2Q9NP81 518 aaKnown RBP23.04■■□□□ 1.28
COL27A1-208ENST00000494780 OCIAD1Q9NX40 245 aa23.04■■□□□ 1.28
COL27A1-208ENST00000494780 C1orf232A0A0U1RR37 186 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 RGSL1A5PLK6 1076 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 EFCAB7A8K855 629 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 EML2O95834 649 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 ATP1A1P05023 1023 aaKnown RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 SPINT3P49223 89 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 PPM1FP49593 454 aaPredicted RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 HHEXQ03014 270 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 GBE1Q04446 702 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 DCAF12Q5T6F0 453 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 HENMT1Q5T8I9 393 aaKnown RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 WDR74Q6RFH5 385 aaPredicted RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 CHST15Q7LFX5 561 aaPredicted RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 FAM129CQ86XR2 697 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 CPNE8Q86YQ8 564 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 IL22RA1Q8N6P7 574 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 PQLC3Q8N755 202 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 CCHCR1Q8TD31 782 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 SH3KBP1Q96B97 665 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 HDAC11Q96DB2 347 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 TEFMQ96QE5 360 aaKnown RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 CBX8Q9HC52 389 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 PKD2L2Q9NZM6 624 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 CTTNBP2NLQ9P2B4 639 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 UVRAGQ9P2Y5 699 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 LCMT1Q9UIC8 334 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 NENFQ9UMX5 172 aa23.03■■□□□ 1.28
COL27A1-208ENST00000494780 PCYT1BQ9Y5K3 369 aaPredicted RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 OAS3Q9Y6K5 1087 aaKnown RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 ZFC3H1O60293 1989 aaKnown RBP23.03■■□□□ 1.28
COL27A1-208ENST00000494780 SPTA1P02549 2419 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 SLC2A4P14672 509 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 TAS2R40P59535 323 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 QPCTQ16769 361 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 IYDQ6PHW0 289 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 LUZP1Q86V48 1076 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 CCDC13Q8IYE1 715 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 CACNA2D3Q8IZS8 1091 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 BMPERQ8N8U9 685 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 CCNYQ8ND76 341 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 HERPUD2Q9BSE4 406 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 MLPHQ9BV36 600 aaPredicted RBP23.02■■□□□ 1.28
COL27A1-208ENST00000494780 GEMIN8Q9NWZ8 242 aaKnown RBP23.02■■□□□ 1.28
COL27A1-208ENST00000494780 TBC1D29Q9UFV1 150 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 PRKAB1Q9Y478 270 aa23.02■■□□□ 1.28
COL27A1-208ENST00000494780 TLN1Q9Y490 2541 aaKnown RBP23.02■■□□□ 1.27
COL27A1-208ENST00000494780 FADS2P1A8MWK0 482 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 ANKRD66B4E2M5 251 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 PPFIA2O75334 1257 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 CSRP3P50461 194 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 SLC10A2Q12908 348 aaPredicted RBP23.01■■□□□ 1.27
COL27A1-208ENST00000494780 ATG14Q6ZNE5 492 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 LYSMD3Q7Z3D4 306 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 ARHGAP22Q7Z5H3 698 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 SLC9B2Q86UD5 537 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 LRRN4Q8WUT4 740 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 ZNF830Q96NB3 372 aaPredicted RBP23.01■■□□□ 1.27
COL27A1-208ENST00000494780 ADGRE3Q9BY15 652 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 DTLQ9NZJ0 730 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 KCNK6Q9Y257 313 aa23.01■■□□□ 1.27
COL27A1-208ENST00000494780 KIR2DS5A0A0G2JLQ3 304 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 A0A0G2JNG1 304 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 A6NCN8 305 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 KIR2DS3K7RE56 304 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 RAD1O60671 282 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 JCHAINP01591 159 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 GYPCP04921 128 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 MMP2P08253 660 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 H2AFZP0C0S5 128 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 ACP5P13686 325 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 LIFP15018 202 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 CD86P42081 329 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 EPHA4P54764 986 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 NFATC2Q13469 925 aa23■■□□□ 1.27
COL27A1-208ENST00000494780 KIR2DS5Q14953 304 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms