RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 E2F1Q01094 437 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 CCDC173Q0VFZ6 552 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 SIX1Q15475 284 aaPredicted RBP15.81■□□□□ 0.12
LIME1-209ENST00000494776 TAF1AQ15573 450 aaPredicted RBP15.81■□□□□ 0.12
LIME1-209ENST00000494776 PHYKPLQ8IUZ5 450 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 PDCD7Q8N8D1 485 aaKnown RBP15.81■□□□□ 0.12
LIME1-209ENST00000494776 CCL4L1Q8NHW4 92 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 GDAP1Q8TB36 358 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 IFI44Q8TCB0 444 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 OR2M4Q96R27 311 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 ABCG4Q9H172 646 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 DPEP2Q9H4A9 486 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 ARFGAP3Q9NP61 516 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 TRNAU1APQ9NX07 287 aaKnown RBP15.81■□□□□ 0.12
LIME1-209ENST00000494776 IL17CQ9P0M4 197 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 NFKBIL1Q9UBC1 381 aaPredicted RBP15.81■□□□□ 0.12
LIME1-209ENST00000494776 KLK13Q9UKR3 277 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 CNOT6Q9ULM6 557 aaKnown RBP15.81■□□□□ 0.12
LIME1-209ENST00000494776 DRG1Q9Y295 367 aaKnown RBP15.81■□□□□ 0.12
LIME1-209ENST00000494776 ARL5AQ9Y689 179 aa15.81■□□□□ 0.12
LIME1-209ENST00000494776 B4DGG1 531 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 PPFIA2O75334 1257 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 ETS1P14921 441 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 LPOP22079 712 aaPredicted RBP15.8■□□□□ 0.12
LIME1-209ENST00000494776 ADCY8P40145 1251 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 PDE1BQ01064 536 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 PEX6Q13608 980 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 DRICH1Q6PGQ1 229 aaPredicted RBP15.8■□□□□ 0.12
LIME1-209ENST00000494776 SLC30A9Q6PML9 568 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 FAM151BQ6UXP7 276 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 EFL1Q7Z2Z2 1120 aaKnown RBP15.8■□□□□ 0.12
LIME1-209ENST00000494776 LINC00523Q86TU6 105 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 SLC35F3Q8IY50 421 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 ARL10Q8N8L6 244 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 BRSK1Q8TDC3 778 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 GPBAR1Q8TDU6 330 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 PTCD2Q8WV60 388 aaKnown RBP15.8■□□□□ 0.12
LIME1-209ENST00000494776 GLYATL1Q969I3 302 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 NAP1L3Q99457 506 aaPredicted RBP15.8■□□□□ 0.12
LIME1-209ENST00000494776 ETNK1Q9HBU6 452 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 TRIM39Q9HCM9 518 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 RAB6BQ9NRW1 208 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 VPS18Q9P253 973 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 PAK5Q9P286 719 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 PADI4Q9UM07 663 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 WASF3Q9UPY6 502 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 NEUROG3Q9Y4Z2 214 aa15.8■□□□□ 0.12
LIME1-209ENST00000494776 OAS3Q9Y6K5 1087 aaKnown RBP15.8■□□□□ 0.12
LIME1-209ENST00000494776 LY6G6EA0A0G2JKS1 128 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 GLYATL1P3A0A0U1RQE8 302 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 USP27XA6NNY8 438 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 ERI2A8K979 691 aaKnown RBP15.79■□□□□ 0.12
LIME1-209ENST00000494776 AP2A1O95782 977 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 GAS8O95995 478 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 GP1BAP07359 652 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 JUPP14923 745 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 AK4P27144 223 aaPredicted RBP15.79■□□□□ 0.12
LIME1-209ENST00000494776 CTBSQ01459 385 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 SMAD1Q15797 465 aaKnown RBP15.79■□□□□ 0.12
LIME1-209ENST00000494776 CHRNA6Q15825 494 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 ATP13A5Q4VNC0 1218 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 PYCR3Q53H96 274 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 ZNF648Q5T619 568 aaPredicted RBP15.79■□□□□ 0.12
LIME1-209ENST00000494776 KCTD11Q693B1 232 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 DENND5AQ6IQ26 1287 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 GUSBP11Q6P575 273 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 PPP1R21Q6ZMI0 780 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 TMPRSS7Q7RTY8 843 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 PRUNE1Q86TP1 453 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 TMPRSS12Q86WS5 348 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 KLHDC8BQ8IXV7 354 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 DNAAF3Q8N9W5 541 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 KYQ8NBH2 561 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 OR4K2Q8NGD2 314 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 MAPK15Q8TD08 544 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 NAT6Q93015 286 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 SCARF2Q96GP6 870 aaPredicted RBP15.79■□□□□ 0.12
LIME1-209ENST00000494776 MS4A14Q96JA4 679 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 TTC25Q96NG3 672 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 OR2AG1Q9H205 316 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 RMI1Q9H9A7 625 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 ARNT2Q9HBZ2 717 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 IL26Q9NPH9 171 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 ATXN10Q9UBB4 475 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 PYCARDQ9ULZ3 195 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 MSRB2Q9Y3D2 182 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 PRKAB1Q9Y478 270 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 U3KQA8 63 aa15.79■□□□□ 0.12
LIME1-209ENST00000494776 EME2A4GXA9 379 aaPredicted RBP15.78■□□□□ 0.12
LIME1-209ENST00000494776 FAM149AA5PLN7 773 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 DNAJC6O75061 913 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 ZSCAN5DPP0CG00 497 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 TPH1P17752 444 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 ACTR1BP42025 376 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 KCNJ1P48048 391 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 ACTR1AP61163 376 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 BIRC2Q13490 618 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 ITGA9Q13797 1035 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 GTF2H3Q13889 308 aa15.78■□□□□ 0.12
LIME1-209ENST00000494776 LRP8Q14114 963 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms