RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 KHDC1Q4VXA5 237 aaKnown RBP11.04□□□□□ -0.64
APTX-230ENST00000494649 SLC25A45Q8N413 288 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 SAP25Q8TEE9 199 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 LRRC61Q9BV99 259 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 TMEM168Q9H0V1 697 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 SYBUQ9NX95 663 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 RNF14Q9UBS8 474 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 CDC23Q9UJX2 597 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 TMPRSS11EQ9UL52 423 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 SUFUQ9UMX1 484 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 PLEKHM1Q9Y4G2 1056 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 SPTBN4Q9H254 2564 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 CCDC188H7C350 402 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 RAD51CO43502 376 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
APTX-230ENST00000494649 PIAS2O75928 621 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 CEACAM5P06731 702 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 CTSEP14091 401 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 NME1P15531 152 aaKnown RBP11.04□□□□□ -0.64
APTX-230ENST00000494649 ARHGAP8P85298 464 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 PTK6Q13882 451 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 HP1BP3Q5SSJ5 553 aaPredicted RBP11.04□□□□□ -0.64
APTX-230ENST00000494649 IZUMO3Q5VZ72 239 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 CASC4Q6P4E1 433 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 CRTC3Q6UUV7 619 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 ADAMTSL4Q6UY14 1074 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 ZNF765Q7L2R6 523 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 DET1Q7L5Y6 550 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 NAXDQ8IW45 347 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 SFTPA2Q8IWL1 248 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 TRAM1L1Q8N609 369 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 ZNF548Q8NEK5 533 aaPredicted RBP11.04□□□□□ -0.64
APTX-230ENST00000494649 RHBDD1Q8TEB9 315 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 TBATAQ96M53 351 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 SRPK1Q96SB4 655 aaKnown RBP11.04□□□□□ -0.64
APTX-230ENST00000494649 ZSCAN5AQ9BUG6 496 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 SLC13A1Q9BZW2 595 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 OR2AG1Q9H205 316 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 DPH5Q9H2P9 285 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 ASB8Q9H765 288 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 ERVMER34-1Q9H9K5 563 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 EIF2B3Q9NR50 452 aaKnown RBP11.04□□□□□ -0.64
APTX-230ENST00000494649 IL1RAPL1Q9NZN1 696 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 FEZ2Q9UHY8 353 aaPredicted RBP11.04□□□□□ -0.64
APTX-230ENST00000494649 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
APTX-230ENST00000494649 SRP72O76094 671 aaKnown RBP11.03□□□□□ -0.64
APTX-230ENST00000494649 AK4P27144 223 aaPredicted RBP11.03□□□□□ -0.64
APTX-230ENST00000494649 MC4RP32245 332 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 KIAA1024LP59773 190 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 HNRNPKP61978 463 aaKnown RBP eCLIP11.03□□□□□ -0.64
APTX-230ENST00000494649 PEX6Q13608 980 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 ZRANB3Q5FWF4 1079 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 C4orf22Q6V702 233 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 CAND1Q86VP6 1230 aaKnown RBP11.03□□□□□ -0.64
APTX-230ENST00000494649 DCP2Q8IU60 420 aaKnown RBP11.03□□□□□ -0.64
APTX-230ENST00000494649 KIF18AQ8NI77 898 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 FAM174AQ8TBP5 190 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 GLYATL1Q969I3 302 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 PLEKHG4BQ96PX9 1271 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 CLPBQ9H078 707 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 SIRPGQ9P1W8 387 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 ATXN10Q9UBB4 475 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 ZNHIT2Q9UHR6 403 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 SNX24Q9Y343 169 aa11.03□□□□□ -0.64
APTX-230ENST00000494649 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.02□□□□□ -0.64
APTX-230ENST00000494649 SPAARA0A1B0GVQ0 90 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 GOLGA8KD6RF30 607 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 H3BM21 787 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 GOLGA8TH3BQL2 631 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 TRIM38O00635 465 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 SLC30A4O14863 429 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 AQP9O43315 295 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 F7P08709 466 aaPredicted RBP11.02□□□□□ -0.64
APTX-230ENST00000494649 TPSB2P20231 275 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 DCDC1P59894 354 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 XIAPP98170 497 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 SLC7A5Q01650 507 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 TPSAB1Q15661 275 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 RNASEH2BQ5TBB1 312 aaKnown RBP11.02□□□□□ -0.64
APTX-230ENST00000494649 PSAPL1Q6NUJ1 521 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 LRRC8BQ6P9F7 803 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 CHST15Q7LFX5 561 aaPredicted RBP11.02□□□□□ -0.64
APTX-230ENST00000494649 NAT8LQ8N9F0 302 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 PPHLN1Q8NEY8 458 aaKnown RBP11.02□□□□□ -0.64
APTX-230ENST00000494649 OR13J1Q8NGT2 312 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 ZNF398Q8TD17 642 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 BTN2A2Q8WVV5 523 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 COX14Q96I36 57 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 SERPINB12Q96P63 405 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 FRMD8Q9BZ67 464 aaPredicted RBP11.02□□□□□ -0.64
APTX-230ENST00000494649 KCTD5Q9NXV2 234 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 FAM8A1Q9UBU6 413 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 ST14Q9Y5Y6 855 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 MRFAP1Q9Y605 127 aa11.02□□□□□ -0.64
APTX-230ENST00000494649 SPTBN2O15020 2390 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 HEATR9A2RTY3 570 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 RGSL1A5PLK6 1076 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 MROH6A6NGR9 719 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 OR2AG2A6NM03 316 aa11.02□□□□□ -0.65
APTX-230ENST00000494649 EFCAB8A8MWE9 144 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms