RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SLC39A7Q92504 469 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 EID2BQ96D98 161 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 LIN37Q96GY3 246 aaPredicted RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 COX14Q96I36 57 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 OR2M4Q96R27 311 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 UBL7Q96S82 380 aaPredicted RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 BRD8Q9H0E9 1235 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 DDX56Q9NY93 547 aaKnown RBP9.53□□□□□ -0.88
MSH5-218ENST00000494646 PKD2L2Q9NZM6 624 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 LOXL2Q9Y4K0 774 aa9.53□□□□□ -0.88
MSH5-218ENST00000494646 PIEZO2Q9H5I5 2752 aa9.52□□□□□ -0.88
MSH5-218ENST00000494646 GCN1Q92616 2671 aaKnown RBP9.52□□□□□ -0.88
MSH5-218ENST00000494646 BSNQ9UPA5 3926 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 F5H423 210 aaPredicted RBP9.52□□□□□ -0.89
MSH5-218ENST00000494646 PPP1R12AO14974 1030 aaPredicted RBP9.52□□□□□ -0.89
MSH5-218ENST00000494646 CST8O60676 142 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 SNX2O60749 519 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 PMPCBO75439 489 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 CPNE6O95741 557 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 PYGLP06737 847 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 ITGA2BP08514 1039 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 ZFXP17010 805 aaPredicted RBP9.52□□□□□ -0.89
MSH5-218ENST00000494646 CD1CP29017 333 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 CCKBRP32239 447 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 TMPRSS3P57727 454 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 RPL26P61254 145 aaKnown RBP9.52□□□□□ -0.89
MSH5-218ENST00000494646 ADCY2Q08462 1091 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 CLN3Q13286 438 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 C16orf72Q14CZ0 275 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 MAP9Q49MG5 647 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 TEX44Q53QW1 395 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 LRRC38Q5VT99 294 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 ALS2CLQ60I27 953 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 CLEC14AQ86T13 490 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 ZC3H18Q86VM9 953 aaKnown RBP9.52□□□□□ -0.89
MSH5-218ENST00000494646 TC2NQ8N9U0 490 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 USP7Q93009 1102 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 HAUS1Q96CS2 278 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 IMP4Q96G21 291 aaKnown RBP9.52□□□□□ -0.89
MSH5-218ENST00000494646 SCARF2Q96GP6 870 aaPredicted RBP9.52□□□□□ -0.89
MSH5-218ENST00000494646 OLFM3Q96PB7 478 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 LYSMD1Q96S90 227 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 NUDT22Q9BRQ3 303 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 ADGRE3Q9BY15 652 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 GPR63Q9BZJ6 419 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 CDH19Q9H159 772 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 SLC25A51Q9H1U9 297 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 ZFYVE1Q9HBF4 777 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 GLOD4Q9HC38 313 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 BPIFA1Q9NP55 256 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 DNPEPQ9ULA0 475 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 INTUQ9ULD6 942 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 RPL26L1Q9UNX3 145 aaKnown RBP9.52□□□□□ -0.89
MSH5-218ENST00000494646 KCNK6Q9Y257 313 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 PCDHA13Q9Y5I0 950 aa9.52□□□□□ -0.89
MSH5-218ENST00000494646 AHCTF1Q8WYP5 2266 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 TEX51A0A1B0GUA7 166 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 A8MU76 341 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 ZNF487B1APH4 448 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 AURKAO14965 403 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 ATXN7O15265 892 aaPredicted RBP9.51□□□□□ -0.89
MSH5-218ENST00000494646 EFSO43281 561 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 DNAJC6O75061 913 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 SLC25A14O95258 325 aaPredicted RBP9.51□□□□□ -0.89
MSH5-218ENST00000494646 CCL4P13236 92 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 PECAM1P16284 738 aaPredicted RBP9.51□□□□□ -0.89
MSH5-218ENST00000494646 PTPN3P26045 913 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 CDKN2BP42772 138 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 CFHR1Q03591 330 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 CDK18Q07002 472 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 VAC14Q08AM6 782 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 SRSF6Q13247 344 aaKnown RBP9.51□□□□□ -0.89
MSH5-218ENST00000494646 EIF3IQ13347 325 aaKnown RBP9.51□□□□□ -0.89
MSH5-218ENST00000494646 PEX6Q13608 980 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 TCEAL1Q15170 157 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 TAF1BQ53T94 588 aaPredicted RBP9.51□□□□□ -0.89
MSH5-218ENST00000494646 HENMT1Q5T8I9 393 aaKnown RBP9.51□□□□□ -0.89
MSH5-218ENST00000494646 KIAA1614Q5VZ46 1190 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 CCDC70Q6NSX1 233 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 PCSK4Q6UW60 755 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 SPOCD1Q6ZMY3 1216 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 CCDC81Q6ZN84 652 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 TMC3Q7Z5M5 1100 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 ZFAND4Q86XD8 727 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 CCDC50Q8IVM0 306 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 SLITRK4Q8IW52 837 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 GPR26Q8NDV2 337 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 TEKT5Q96M29 485 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 TRIB3Q96RU7 358 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 SLC38A3Q99624 504 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 CMKLR1Q99788 373 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 ANP32EQ9BTT0 268 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 SPATA16Q9BXB7 569 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 HEMGNQ9BXL5 484 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 C10orf88Q9H8K7 445 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 ATXN10Q9UBB4 475 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 TBC1D29Q9UFV1 150 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 SPO11Q9Y5K1 396 aa9.51□□□□□ -0.89
MSH5-218ENST00000494646 SDK2Q58EX2 2172 aa9.5□□□□□ -0.89
MSH5-218ENST00000494646 IGHV1OR21-1A0A087WYE8 117 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms