RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 USP53Q70EK8 1073 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 SPRED1Q7Z699 444 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 ZNF248Q8NDW4 579 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 HAUS1Q96CS2 278 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 LIN37Q96GY3 246 aaPredicted RBP15.48■□□□□ 0.07
LIMS2-216ENST00000494613 RBM41Q96IZ5 413 aaKnown RBP15.48■□□□□ 0.07
LIMS2-216ENST00000494613 TMEM74Q96NL1 305 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 OR2M4Q96R27 311 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 SPATA16Q9BXB7 569 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 GPR63Q9BZJ6 419 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 THSD1Q9NS62 852 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 FAM153AQ9UHL3 310 aa15.48■□□□□ 0.07
LIMS2-216ENST00000494613 PCYT1BQ9Y5K3 369 aaPredicted RBP15.48■□□□□ 0.07
LIMS2-216ENST00000494613 ARHGEF17Q96PE2 2063 aaPredicted RBP15.48■□□□□ 0.07
LIMS2-216ENST00000494613 ITPR1Q14643 2758 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 UNC13CQ8NB66 2214 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 HACD1B0YJ81 288 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 D6RAR5 112 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 AURKAO14965 403 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 IPO7O95373 1038 aaKnown RBP15.47■□□□□ 0.07
LIMS2-216ENST00000494613 EPOP01588 193 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 NFKB1P19838 968 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 WNT3AP56704 352 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 PCBP4P57723 403 aaKnown RBP15.47■□□□□ 0.07
LIMS2-216ENST00000494613 XRCC4Q13426 336 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 PPP2R5EQ16537 467 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 AMZ1Q400G9 498 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 KDELC1Q6UW63 502 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 BBS12Q6ZW61 710 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 RAB11FIP2Q7L804 512 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 CHST15Q7LFX5 561 aaPredicted RBP15.47■□□□□ 0.07
LIMS2-216ENST00000494613 TMPRSS9Q7Z410 1059 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 PIM3Q86V86 326 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 GALNT13Q8IUC8 556 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 SPACA3Q8IXA5 215 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 ZNF567Q8N184 647 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 FBXO39Q8N4B4 442 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 HTR3CQ8WXA8 447 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 FCRL5Q96RD9 977 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 SRPK1Q96SB4 655 aaKnown RBP15.47■□□□□ 0.07
LIMS2-216ENST00000494613 VAT1Q99536 393 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 STRADBQ9C0K7 418 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 CDH19Q9H159 772 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 C10orf88Q9H8K7 445 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 EPB41L5Q9HCM4 733 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 TRIM39Q9HCM9 518 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 VPS18Q9P253 973 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 EFR3BQ9Y2G0 817 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 SPO11Q9Y5K1 396 aa15.47■□□□□ 0.07
LIMS2-216ENST00000494613 COL27A1Q8IZC6 1860 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-216ENST00000494613 CDRT15L2A8MXV6 281 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 H7C0C1 242 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 PLD2O14939 933 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 PJA2O43164 708 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 SLC25A14O95258 325 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-216ENST00000494613 BPIP17213 487 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 RBL1P28749 1068 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 CD1CP29017 333 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 CCKBRP32239 447 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 CTNNA1P35221 906 aaKnown RBP15.46■□□□□ 0.07
LIMS2-216ENST00000494613 GPR3P46089 330 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 ATP5OP48047 213 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 TLE3Q04726 772 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 LRP8Q14114 963 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 ZNF648Q5T619 568 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-216ENST00000494613 ZNF574Q6ZN55 896 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-216ENST00000494613 ZNF438Q7Z4V0 828 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 ACRBPQ8NEB7 543 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 BAG1Q99933 345 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-216ENST00000494613 HERPUD2Q9BSE4 406 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 SEMA6CQ9H3T2 930 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 PRORYQ9H606 182 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 RMI1Q9H9A7 625 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 BPIFA1Q9NP55 256 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 ARFGAP3Q9NP61 516 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 RAD18Q9NS91 495 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 KLHL8Q9P2G9 620 aaPredicted RBP15.46■□□□□ 0.07
LIMS2-216ENST00000494613 ATXN10Q9UBB4 475 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 TRHDEQ9UKU6 1024 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 ZNF711Q9Y462 761 aa15.46■□□□□ 0.07
LIMS2-216ENST00000494613 F5H423 210 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-216ENST00000494613 APOC4-APOC2K7ER74 178 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 AGRPO00253 132 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 ZW10O43264 779 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 GRID2O43424 1007 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 NUAK1O60285 661 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 EML2O95834 649 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 APOC2P02655 101 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 PYGMP11217 842 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 HOXB3P14651 431 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-216ENST00000494613 ZNF8P17098 575 aaPredicted RBP15.45■□□□□ 0.06
LIMS2-216ENST00000494613 UGT1A5P35504 534 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 VAV2P52735 878 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 RWDD2BP57060 319 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 BIRC2Q13490 618 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 NR1D2Q14995 579 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 KIF26BQ2KJY2 2108 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 SIRPB2Q5JXA9 342 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 ALS2CLQ60I27 953 aa15.45■□□□□ 0.06
LIMS2-216ENST00000494613 IYDQ6PHW0 289 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms