RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 PCSK7Q16549 785 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PAGE3Q5JUK9 113 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PTRH1Q86Y79 214 aaKnown RBP10.09□□□□□ -0.79
LINC00488-201ENST00000494582 SVOPQ8N4V2 548 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 DNAAF3Q8N9W5 541 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 LEMD2Q8NC56 503 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 CCNYQ8ND76 341 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 OSCP1Q8WVF1 389 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PYCR2Q96C36 320 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 RNF170Q96K19 258 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 TEX37Q96LM6 180 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 TSNARE1Q96NA8 513 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 DEPDC7Q96QD5 511 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PDCD2LQ9BRP1 358 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 MLPHQ9BV36 600 aaPredicted RBP10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PORCNQ9H237 461 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PRDM12Q9H4Q4 367 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 GIMAP4Q9NUV9 329 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 DPP3Q9NY33 737 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 DSEQ9UL01 958 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 CCDC154A6NI56 674 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 hCG_2039718K7EN88 272 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PRSS23O95084 383 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 ICAM1P05362 532 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 ATP5F1P24539 256 aaPredicted RBP10.09□□□□□ -0.79
LINC00488-201ENST00000494582 ARL2P36404 184 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 TAS2R39P59534 338 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 DNAJB13P59910 316 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 DGKZQ13574 1117 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 CAPSQ13938 189 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 NFE2Q16621 373 aaPredicted RBP10.09□□□□□ -0.79
LINC00488-201ENST00000494582 ZNF484Q5JVG2 852 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 CES5AQ6NT32 575 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 TRAF7Q6Q0C0 670 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 CYP20A1Q6UW02 462 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 SLC26A9Q7LBE3 791 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PID1Q7Z2X4 250 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 RNF135Q8IUD6 432 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 SYTL1Q8IYJ3 562 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 FLAD1Q8NFF5 587 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 MCOLN3Q8TDD5 553 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 JPH3Q8WXH2 748 aaPredicted RBP10.09□□□□□ -0.79
LINC00488-201ENST00000494582 PROX1Q92786 737 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 LGALS12Q96DT0 336 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 ZFYVE19Q96K21 471 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 BDH2Q9BUT1 245 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 GSTO2Q9H4Y5 243 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 TDRD3Q9H7E2 651 aaKnown RBP10.09□□□□□ -0.79
LINC00488-201ENST00000494582 ZBTB20Q9HC78 741 aaPredicted RBP10.09□□□□□ -0.79
LINC00488-201ENST00000494582 CASS4Q9NQ75 786 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 IGSF5Q9NSI5 407 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 TSPAN16Q9UKR8 245 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 KIAA1257Q9ULG3 409 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 SNX6Q9UNH7 406 aa10.09□□□□□ -0.79
LINC00488-201ENST00000494582 BBIP1A8MTZ0 92 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 H0YCG3 227 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 ANGPT2O15123 496 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 RGS20O76081 388 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 DDX5P17844 614 aaKnown RBP10.08□□□□□ -0.8
LINC00488-201ENST00000494582 PRKACGP22612 351 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 FMO3P31513 532 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 GRK3P35626 688 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 TGFBR2P37173 567 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 PTGER2P43116 358 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 TPD52P55327 224 aaPredicted RBP10.08□□□□□ -0.8
LINC00488-201ENST00000494582 OR2B6P58173 313 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 RAB10P61026 200 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 IFRD2Q12894 506 aaPredicted RBP10.08□□□□□ -0.8
LINC00488-201ENST00000494582 SURF1Q15526 300 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 NKG7Q16617 165 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 ZFP69Q49AA0 526 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 CCSAPQ6IQ19 270 aaPredicted RBP10.08□□□□□ -0.8
LINC00488-201ENST00000494582 PRSS48Q7RTY5 328 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF438Q7Z4V0 828 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 UBQLNLQ8IYU4 475 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 PARP16Q8N5Y8 322 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 SIMC1Q8NDZ2 872 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 FRS2Q8WU20 508 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 C19orf60Q96EN9 201 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 VPS35Q96QK1 796 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 COQ7Q99807 217 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 FAM49AQ9H0Q0 323 aaPredicted RBP10.08□□□□□ -0.8
LINC00488-201ENST00000494582 UBP1Q9NZI7 540 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 FBXO9Q9UK97 447 aaPredicted RBP10.08□□□□□ -0.8
LINC00488-201ENST00000494582 CPSF3Q9UKF6 684 aaKnown RBP10.08□□□□□ -0.8
LINC00488-201ENST00000494582 NDUFAF1Q9Y375 327 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 FAM95CA0A1B0GW59 222 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 AP2A1O95782 977 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 GOT2P00505 430 aaKnown RBP10.08□□□□□ -0.8
LINC00488-201ENST00000494582 RBP1P09455 135 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 ALOX12P18054 663 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 PSMB9P28065 219 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 KCNC1P48547 511 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 ATP4BP51164 291 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 FOXA1P55317 472 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 CSHL1Q14406 222 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 CLCA4Q14CN2 919 aa10.08□□□□□ -0.8
LINC00488-201ENST00000494582 DUSP7Q16829 419 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms