RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 LRRC72A6NJI9 287 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 C16orf96A6NNT2 1141 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 A8MV72 311 aaPredicted RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 DNM1LO00429 736 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ANGPT2O15123 496 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 SCAMP1O15126 338 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ENTPD3O75355 529 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 WDR47O94967 919 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 NDST3O95803 873 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 FTCDO95954 541 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 IFNB1P01574 187 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 MBPP02686 304 aaPredicted RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ASGR1P07306 291 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TPM1P09493 284 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CTAGE8P0CG41 777 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TXNP10599 105 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ACTN1P12814 892 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 AKR1A1P14550 325 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 PKMP14618 531 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CSF2RAP15509 400 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 SAT1P21673 171 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 PTAFRP25105 342 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 EPHA8P29322 1005 aaPredicted RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 GCH1P30793 250 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 IDUAP35475 653 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 BSGP35613 385 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 PGM1P36871 562 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 HSD17B2P37059 387 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 RFX2P48378 723 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 HSD17B4P51659 736 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 RPS16P62249 146 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 RPP30P78346 268 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 MRPS5P82675 430 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ROR2Q01974 943 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 GRSF1Q12849 480 aaKnown RBP eCLIP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 NPRL3Q12980 569 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TRDNQ13061 729 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 AIMP2Q13155 320 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 DCTN2Q13561 401 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CAPSQ13938 189 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CAMK1Q14012 370 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 FRG1Q14331 258 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ARHGEF6Q15052 776 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 NTRK2Q16620 822 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 MEP1BQ16820 701 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 IZUMO4Q1ZYL8 232 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ANXA2RQ3ZCQ2 193 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 SLC39A12Q504Y0 691 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ARHGAP15Q53QZ3 475 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TDRD12Q587J7 1177 aaKnown RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 C3orf38Q5JPI3 329 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 C9orf152Q5JTZ5 239 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 C6orf10Q5SRN2 563 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 PRAMEF19Q5SWL8 479 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 FAM69AQ5T7M9 428 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 AADACL4Q5VUY2 407 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 SHEQ5VZ18 495 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ADALQ6DHV7 355 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 GRHL2Q6ISB3 625 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TMEM154Q6P9G4 183 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 USP17L6PQ6QN14 398 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 DHRS13Q6UX07 377 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ZYG11AQ6WRX3 759 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 MSANTD1Q6ZTZ1 278 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TRILQ7L0X0 811 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 OTOAQ7RTW8 1153 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ATG9AQ7Z3C6 839 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CACNA2D4Q7Z3S7 1137 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ADGRG6Q86SQ4 1221 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CTAGE6Q86UF2 777 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 SPATA24Q86W54 205 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CTAGE4Q8IX94 777 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 PDCL2Q8N4E4 241 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ARL14Q8N4G2 192 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ARL14EPQ8N8R7 260 aaPredicted RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 SLC4A11Q8NBS3 891 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 CCDC150Q8NCX0 1101 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TNIP2Q8NFZ5 429 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 OR1N1Q8NGS0 311 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 METTL6Q8TCB7 284 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ABHD5Q8WTS1 349 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 AKAP1Q92667 903 aaKnown RBP eCLIP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 SGF29Q96ES7 293 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 PRR11Q96HE9 360 aaPredicted RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 C8orf76Q96K31 380 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 FER1L6-AS2Q96M78 137 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 FAM111AQ96PZ2 611 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 PRAM1Q96QH2 718 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 SH3GL2Q99962 352 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 GAL3ST1Q99999 423 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TUBA1CQ9BQE3 449 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ELOVL1Q9BW60 279 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 GCOM2Q9BZD3 368 aaPredicted RBP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 TRIM7Q9C029 511 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 FTOQ9C0B1 505 aaKnown RBP eCLIP2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ANKRD2Q9GZV1 360 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 WNT5BQ9H1J7 359 aa2.26□□□□□ -2.05
PTPN12-212ENST00000494248 ISCUQ9H1K1 167 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms