RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 BIRC7Q96CA5 298 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 CERS2Q96G23 380 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 ZC3H10Q96K80 434 aaKnown RBP12.36□□□□□ -0.43
SNX17-208ENST00000493711 C9orf72Q96LT7 481 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 ZNF778Q96MU6 729 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 VPS35Q96QK1 796 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 CCDC77Q9BR77 488 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 FUT8Q9BYC5 575 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 TXLNGYQ9BZA5 131 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 CD93Q9NPY3 652 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 CATSPERZQ9NTU4 200 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 MOCS1Q9NZB8 636 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 NINJ2Q9NZG7 142 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 SLC2A6Q9UGQ3 507 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 COQ6Q9Y2Z9 468 aa12.36□□□□□ -0.43
SNX17-208ENST00000493711 A0A087WUV0 522 aaPredicted RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 A0A0U1RQS6 177 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 CCDC78A2IDD5 438 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 CCDC162PA2VCL2 907 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 PRR5-ARHGAP8B1AHC4 643 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 SLC31A1O15431 190 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 CD3EAPO15446 510 aaKnown RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 LILRB5O75023 590 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 OGNP20774 298 aaKnown RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 KELP23276 732 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 MAT2AP31153 395 aaKnown RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 HOXD12P35452 270 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 TRIM23P36406 574 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 GPR1P46091 355 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 TTPAP49638 278 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 ARSDP51689 593 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 YPEL5P62699 121 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 TMPRSS15P98073 1019 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 STAT4Q14765 748 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 NAA30Q147X3 362 aaPredicted RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 CHRNA6Q15825 494 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 LDLRAP1Q5SW96 308 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 LYSMD4Q5XG99 296 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 ALS2CLQ60I27 953 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 PMS2CLQ68D20 193 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 RAET1GQ6H3X3 334 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 FAM151BQ6UXP7 276 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 KIAA0408Q6ZU52 694 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 IQCHQ86VS3 1027 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 KCNMB4Q86W47 210 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 PHYKPLQ8IUZ5 450 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 MREGQ8N565 214 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 DNASE2BQ8WZ79 361 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 SNX19Q92543 992 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 SCAMP4Q969E2 229 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 SERAC1Q96JX3 654 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 HSPA12BQ96MM6 686 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 FCRL3Q96P31 734 aaPredicted RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 CYTH2Q99418 400 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 KLF6Q99612 283 aaPredicted RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 WDR83Q9BRX9 315 aaKnown RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 ZCCHC2Q9C0B9 1178 aaKnown RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 CDC42EP4Q9H3Q1 356 aaKnown RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 SEMA4AQ9H3S1 761 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 ASB8Q9H765 288 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 WDR26Q9H7D7 661 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 PPCSQ9HAB8 311 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 LRRC4CQ9HCJ2 640 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 PHPT1Q9NRX4 125 aaPredicted RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 SUSD2Q9UGT4 822 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 CD84Q9UIB8 345 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 INVSQ9Y283 1065 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.35□□□□□ -0.43
SNX17-208ENST00000493711 DCHS1Q96JQ0 3298 aa12.35□□□□□ -0.43
SNX17-208ENST00000493711 ZDBF2Q9HCK1 2354 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 DMDP11532 3685 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 TRBV5-4A0A0C4DH59 114 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 A6NNZ2 444 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 AGAP14A8MT82 685 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 GPR89AB7ZAQ6 455 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 CFAP99D6REC4 459 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 GOT2P00505 430 aaKnown RBP12.34□□□□□ -0.43
SNX17-208ENST00000493711 GPR89BP0CG08 455 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 RALBP11234 206 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 GNSP15586 552 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 BCKDHBP21953 392 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 PMLP29590 882 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 FOXN2P32314 431 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 RABIFP47224 123 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 PRSS12P56730 875 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 GPX6P59796 221 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 RACK1P63244 317 aaKnown RBP12.34□□□□□ -0.43
SNX17-208ENST00000493711 PEX6Q13608 980 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 FGL2Q14314 439 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 ITIH4Q14624 930 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 PTPRCAPQ14761 206 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 IRF4Q15306 451 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 KLHL38Q2WGJ6 581 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 PLK5Q496M5 336 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 CES3Q6UWW8 571 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 TAS2R42Q7RTR8 314 aa12.34□□□□□ -0.43
SNX17-208ENST00000493711 GALNT7Q86SF2 657 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms